Twilight Sparkle has been through quite a lot during the course of her young life. With her friends she has re-discovered an ancient magic, saved the world from Nightmare Moon, and imprisoned the embodiment of Chaos in stone.
However, she cannot help but feel in over her head when she wakes up aboard an alien space station, where strange creatures are running dangerous experiments on her and others in an effort to make living weapons.
That's just the beginning however. She soon finds herself and her people caught up in the middle of an interstellar war over one of the most basic principals of sapient life.
The right to think for yourself.
Just an idea I had, and I'm not even really sure where it's going to go. But I liked it and I thought that it would make a great story. comments would be appreciated, especially those geared towards making me a better writer.

Cover Art by Mario94 on deviantART URL: http://mario94.deviantart.com/

Preread by Doomotter

Also, mad props to my new editor Eddiehowell! He's great!

Additional characters and tags will be added as the story dictates.
MLP is owned by Hasbro and Faust.
All other characters and worlds in this story are made by me.
This story is 100% approved by Twilights Library!
Also, if you don't like my story, that's fine. Just tell me what I'm doing wrong before you click that downvote button. How can I improve unless I know what I'm doing wrong?
WOOT! FEATURED 11/24/14!! I NEVER THOUGHT IT WOULD HAPPEN!

Equis has fallen. Long ago, those few gifted with immortality left their dying world, searching for a new home.

That was ages ago. They have been adrift in space for an eternity, and they have found nothing to brighten their spirits. They are starting to lose hope that there is anything for them out here.

However, what they don't realize is that their journey has just barely begun...

-GM, master of Immortals.

Cover drawn by Little Duke! http://www.fimfiction.net/user/Little+Duke

Edit: Woah. It got on the front page. This has never happened before. Thank you all so much.

Two thousand years after the return of Princess Luna, Equestria's technology and magic has advanced far enough that the once far off dream of faster than light travel is now a reality.

And that reality is the ES Harmony, the pride of its designer, Princess Twilight Sparkle, and Equestria's first FTL capable starship. It is due to make its maiden voyage to travel further than anypony before it.

And yet when they receive a distress call from origins unknown, this ship's maiden voyage will become one the crew will never forget.

(Featured on 31/7/2016)
(Not a strict crossover with Star Trek, but here Equestria Girls takes place in the Star Trek Universe)

After years of shame and ridicule, archaeologist and explorer Lyra Heartstrings stumbles across a discovery that validates all her theories and ideas in one fell swoop. Along with her best friend, Bon Bon, and her old classmate Cadance, they find themselves faced with a mystery and marvel that may change everything.

Following the next greatest lead found in the database of an ancient race, another international team is formed. Led by Doctors Carter and Jackson, they strike out to explore another network of Stargates discovered in a galaxy on the edge of the local cluster. In the process, their findings will cause them to question much of what they thought they knew.

The adventures continue and unlikely allies will face dangers new and old as the Legacy of the Ancients continue to unravel in the latest chapter of the universe.

[Co-written by Thunderclap and Shagohad12] Formerly co-written by Grey Cait. [Edited by: Lithl and m2pt5][Cover art: 1, 2 modified + vectors]
Now with a Russian reading by SviMik

Ripped from home with no explanation to a place that is both incredibly strange and eerily familiar. What world he walks on, what these creatures are, why he's here. There are many things Rajrishi does not understand about Equestria. He hopes to fix that.

But mostly he just wants to go home.

A United States Air Force AC-130 is transported to Equestria while in transit through the Bermuda Triangle. Insanity aside, this motley crew of aviators must juggle their duties while treading the uncertain waters of diplomacy.

Disclaimer: I've decided to write this in an attempt to get a more realistic view of what military in Equestria would act like, rather then the dark brooding kill happy stuff I've read. So with that being said, these guys will act more like diplomats. So there won't be much gore, and they certainly won't be going on a killing spree. (Obviously, as fiction the term realistic is applied loosely. My main goal is a realistic characterization of one specific community within the military. Just keep an open mind about how sub-cultures can exist within an entity as large as the U.S. military and you'll be fine.) Also rated teen for obvious reasons, morbid humor, light swearing, and background stories.

It has been more than one hundred years since Celestia banished Nightmare Moon. While Equestria has enjoyed a century of relative peace and prosperity, there are still lingering tensions between the three pony tribes.

Shadow Kicker, a proud warrior of Pegasopolis, must navigate the treacherous noble court of Canterlot and address the concerns and wounded pride of her own tribe in a desperate effort to prevent matters from coming to open warfare.

Twilight knew that there would be times she would find herself in over her head. When Princess Celestia decides that her proximity to a Village Hidden in the Everfree makes her a perfect candidate for participating in the village's introductory tour and citizenship ceremony, the young alicorn finds out just how little she really knows about her own world.

Quick note: I've been having difficulties with my formatting since the update so if it's messed up or anything like that let me know. I'll try to fix it ASAP

This story is a sequel to Wanderings of a Non-Brony

After the six year journey around the planet in Wanderings of a Non-Brony, The human TD Harrison Powell finds himself in Equestria for good. He sees no choice but to settle down in Ponyville, ready to live the rest of his life as best as he can.

This is his life.

Edited by Marioland1 and Strike89