This story is a sequel to The Code's Apprentice

Sequel To : The Code's Apprentice

The land of Equestria has been changed forever.

New monarchs sit upon the thrones of the Sun and Moon, the once almighty power of Harmony overturned to make way for a new Diarchy of Balance. Political unrest and turmoil have engulfed the land, and at the very center of it all, Princess Celestia - renamed Tia Sunbeam - seeks atonement for the crimes she committed in the name of Eternal Harmony.

With much of her power sealed away, Tia must live amidst the citizens of Ponyville as the world changes all around them. As Ponyville works to rebuild following the struggle between student and teacher, they must cope with the edicts of a new government determined to bring equality to all creatures, beliefs, and ways of life - even those that were long since banished to the dark places of the world.

Tia Sunbeam will struggle with her own deeply held convictions on the way the world should be, versus the way it will now become. She will face a truth she has long since denied, and realize the true meaning of Harmony. And perhaps, most importantly of all... She must make some Friends.

Cover art by SinSays at http://sinsays.tumblr.com/ - Go spend some money with her! :D
Oh, and go check out my new side story - Rise - It's going to become relevant here!
(character tags are not comprehensive! Some are being kept secret! ;3)

Twilight Sparkle is pregnant - and nopony is more surprised than she is. Confronted with the overwhelming responsibility of motherhood, the young mare has to decide whether she is truly up to the task of being a single parent. For a pony who has proven her dedication, intelligence, and strength of character countless times, armed with the bonds of friendship and love, it shouldn't be a difficult choice.

But, as with everything Twilight has done in her life, the circumstances and decisions she must manage are anything but simple.

Once, Ford was just a human who led a boring and lonely life. But suddenly, his life is turned upside down as a mysterious golden light not only transported him to the magical world of Equestria, but has also transformed him into a Pegasus Pony without a Cutie Mark! Despite how much of a fan he is of MLP:FIM, he can't help but feel concern on what kind of consequences his presence might bring on account of his knowledge of a fictional cartoon show.

Now, under the identity of "Ford Mustang", he must face many trials ahead of him. Will he be able to blend in with the rest of the pony community? Will he ever be able to earn his Cutie Mark? Can he make it back home in time before the ponies learn the truth about him? And what happens when he starts to fall in love with a certain cyan Pegasus with the spectrum-colored mane? Find out on the incredible journey of Ford Mustang!

Twilight has always loved mysteries. Researching them, dissecting them, and finally, solving them. Almost nothing could compare to the joy she feels when finding an answer to a question no pony knew.

But there are mysteries with answers better left unheard, truths that aren't meant to be known. Now Twilight has solved a mystery with an answer she doesn't want, an answer she can never forget.

Isolated from her friends and taken prisoner in the middle of a war, Twilight must deal with the very real dangers of being percieved as an enemy as well as the nightmares of her arrival on 'Earth'. Can she overcome her own fears and the fears of her captors? Will the wayward unicorn's assistance be a boon or a curse to the 'humans?' Most importantly, will she ever find her way home?

"In short, it's a story of friendship and plasma rifles, with the emphasis on the friendship. The characters are well written, the XCOM setting is fleshed out very well, and the story is compelling. If you love XCOM, you'll love the story, but even if you've never heard of it, it's more than worth giving the first 3 chapters a read.

There's excellent action later on, but the real strength lies in the collision between the friendly and naive world of Twilight Sparkle and the desperate world of humans fighting a losing war for survival and willing to do anything to turn the tide."

--Arzoo

(XCOM/FiM crossover)
(Cover art commissioned by a friend and created by the magnificent FoxInShadow!)
(Original cover art by the amazing Carnelian can be viewed here!)
(Gore tag for blood and some violence)
(Many thanks to the studius OminousTen, Arzoo, xXFluttershyForeverXx and finally Setokaiva for giving my rambles a once-over)
(Now with it's own TV Tropes page! Get to tropin' folks!)

A Metroid Crossover

A meteor, resistant to magical manipulation, crashes in Equestria, Planet Equis, and soon spreads an unknown poison throughout the land. Containment is all but failing and the Princesses have little power to stop the spread of the Great Poison. The Elements of Harmony are of little use as no knowledge exists of this threat that consumes all life. Help comes from a certain Hunter, clad in metal.

Samus Aran will not only fight for her life as always, but her own sanity as well as these ponies that she begrudgingly starts seeing as allies. New horrors and abilities await her as a reason to fight slowly festers within her, possibly unlocking something she had been denied for so long: Friendship.

Notes and Resources:

This takes place after Echoes. The events of Corruption will have not happened yet. In terms of MLP, consider everything up to and including the Crystal Empire. Princess Twilight does not exist here, etc. The official Metroid Timeline can be found here.

As well, this story references the manga in many places. Reading of it is not required and I try my best to explain the context, but if you're interested, both volumes can be found here.

EDIT: This story was written over two and a half years, beginning in 2013. You'll probably notice the difference in writing as the chapters progress.

Stop me if you heard this one: I have been sent to Ponyville on a personal quest. Now I'm stuck in a town with a cowgirl with a manly-sounding name, A crazy cat lady with variety, a damsel who wants to make me look fabulous, an egomaniac (who could be gay... it's the hair), and a mare so hyped up I swear she was on something.

No, I'm not Twilight Sparkle, but it is HER friends. I don't have any. That's why I'm stuck here. My name is Woundsalt.

Uber thanks to Carnival for this magnificent creation of a cover.

And do you really need a warning that there are spoilers in the comments? I expected more from you.

FANGROUP!
PATREON!
FEATURED SINCE 30/08/14 AND PRETTY MUCH DOING IT SINCE!

The wheel of time turns, as destiny and history clash together.

Fifty years into the future, Sunset Shimmer is Princess Twilight Sparkle's most faithful student. She is smart and eager, but doesn't always think things through. Her life had been perfect, right up to the End of the World.

With a ruined future, Sunset travels into the past to alter the course of history. With only her mentor's cryptic word to go on, Sunset and the Elements of Harmony must solve the riddle of the Dark Regalia and stop the mysterious Vesper Radiance from rising to power. But the further Sunset goes, the more she feels like she's been through it all before.

Is destiny set in stone, or can Sunset shape her own future? Only time will tell.

Featured on Equestria Daily 6/16/13
Gratefully edited by JustAnotherTimeLord, Icarus_Gizmo, Cerulean Voice and Bad_Seed_72

The Sunset of Tropes page!

For a thousand years, the Code of Harmony has ruled Equestria, and the Code of Dissonance has sabotaged its works at every turn. Now the war for control over the land will come to a head, and one unicorn's decision may decide the fate of all.

For though she does not know it, Twilight Sparkle is the shining example of the Code of Harmony. Her teacher, Princess Celestia is Harmony's most powerful master and she knows her enemies are hatching a plan that threatens to cast down the Harmony of her throne and all she has sacrificed to create.

What she does not know is her foe seeks a new Apprentice to turn to his dark ways. A unicorn with seemingly limitless potential for magic, whose thirst for knowledge may yet lead her down a dark path, who is known to be such a faithful student of magic, eagerly seeking the truth no matter how forbidden it might be...

Sequel: Code of Harmony

Terrence found himself lost in a sea of solitude while living his dream. Until a chance opportunity forces itself upon him. Now he finds himself in Equestria, where the horses and ponies he grew up raising are now sentient and find him to be... rather odd. Except one. And she finds him to be her one chance at happiness.

Author: This is my first fic EVER, so yeah.
Props go to tallestbrony, he helped me through all this.