Commander Shepard remembers firing the crucible. She remembers she had to make an important choice. She remembers good friends, a lover, and plenty of loyal crewmen.

She just can't remember what her choice was. What the threat she was striving so hard to end was. Or what the faces of the most important people in her life look like.

She also has no idea how she wound up in the monster filled forest she's come to call home for the past eight months. Or how she picked up a snarky A.I. making its home in her omni-tool.

This story is a sequel to MLA: Perihelion

It's been a handful of years since Twilight came into her own as a Princess of Equestria, a few years spent in peace and harmony without so much as an angry spirit or clandestine invasion to take away from the tranquility of Equestrian life. Unprecedented developments in the technological and thaumaturgical sciences seem to be preparation for something, though nopony realizes what that something might be.

Nopony except the Princesses, who have not failed to see the signs of impending disaster that began with the mass kidnappings just following the Summer Sun Celebration. When all their preparations are turned upside down, can an alliance with the mysterious Precursors turn the tides of the most devastating war in Equestrian history, while there is still anything left to save? Enemies and allies appear in the most unlikely of places, and friendship with a dying elder race can be more dangerous than an invasion of Dragons and Changelings. What is a pony willing to give in defense of harmony? What are they willing to sacrifice?

This story now has a companion piece, The Sunset Campaign! This story is designed to bring Harmony Defended more into line with the three-story version of My Little Apprentice. If you read Apogee and Perihelion, you may want to read that as well!

This story was written prior to season five, and as such any events which transpire therein may or may not be treated as canonical. All events up to and including "Twilight's Kingdom" are treated as having occurred, however.

A huge thanks to my Alpha Readers! Thanks to these wonderful people, new chapters aren't nearly so riddled with mistakes and errors as they used to be. Thanks to Sparktail, TwoBit, Withered Pyre, and Zutcha. Zutcha of course deserves double the love, since he's also the artist of the cover and any other fantastic art that finds its way into the story.

Alex has been thrown around realities for a long time without control. This time, he jumped to Ponyville and will be staying for a lifetime. Can he build a life here? Does he want to? What about the family he left behind?

Cover art is a commission by AphexAngel

Also, a big thanks to my ediors, pre-readers, and idea givers: Marvelous Cheshire,
Tosety, DiscordsAdvocate, KMCA, warpd, Spect, Makkelulu, KitsuneNoYomeiri, earthrise, Pen Brush
genuis101

This story is a sequel to Lost into Shadow

The impossible has happened, through all the pain and darkness, Twilight Sparkle succeeded in her impossible mission...mostly. King Sombra is still plenty rough around the edges, but despite being an old dog he's making an effort to learn new tricks. Where will this new way of life take him? He has absolutely no idea, but with his queen to guide him, what could possibly go wrong?

In the far reaches of Canterlot Castle, high above in the towers lived the archmage. Everypony knew her, yet few had met her.

Twilight Sparkle sighed, having teleported away another noble seeking favors before reaching the top of the stairs for the second time today. They never learned. As the archmage, she already dealt with political squabbles far too often without inviting them into her home. Aside from personal favors for Celestia, she did what was required of her position and then returned to seclusion and research.

The nobility grumbled that no archmage should be a commoner, and Twilight’s disrespect toward them proved it. Each and every time they were forced to bow to her, they hated what they saw: the position, the status, the deference.

Was she not powerful? Was she not great?

Twilight, now reading through dusty scrolls and long forgotten tales, wrote in her notes — notes gathering dust of their own. A brief thought flashed through her mind.

Am I not powerful? Am I not great?

And then Twilight picked up The Tale of the Royal Pony Sisters.

Defunct side stories told in Across the Boundary. They can still provide a little context, but when in doubt, the main story here is canon.

Cover art provided by Lafiir

Twilight Sparkle has too much magic, and it will take her decades to learn to control it. Her spectacular loss of control during her entrance exam only proves that fact. She is a danger to herself and others.

After Sunset Shimmer’s disappearance, Princess Celestia needs a new student to bear The Element of Magic to defeat Nightmare Moon. With all of Equestria at stake, Twilight Sparkle…is not the pony she needs.

Princess Celestia seals Twilight Sparkle’s magic with the distant promise of one day teaching her.

But there are two diarchs of Equestria. Amidst a lucid dream, an offer is made.

“Hello, Twilight. Would you like to be my student?”

Cover art provided by Lafiir.

This story is a sequel to Queen No More

Twilight Sparkle made the most foolish and selfless decision possible. She saved the life of Queen Chrysalis. The dynamics of Twilight's relationships begin to change as Chrysalis introduces the changeling hivemind to her pony caretaker. Chrysalis' only hope was to relieve her loneliness, but events begin to unfold that will change Equestria forever.

Nothing is stronger than the power of redemption...

NOTES
1. This is the sequel to Queen No More but there is a time jump between its end and Hive Alive's beginning.
2. This is Alternate universe due to the fact that this story will run off of a disparate timeline. Events forward of season 2 may be similar OR significantly altered.
3. There is mention in Chapter 3 of an old changeling tale titled As a Star. A version of this has been written by Farseer.

NO MORE UPDATES: The story is complete. A sequel has been made: Queen of Equestria.

FULL TIMELINE SUMMARY OF STORY AND CHAPTERS

2014 ANNIVERSARY AND HOLIDAY UPDATE
Updated outer cover, inner cover, and description!
2 new HD wallpapers!
Hive Alive 2013
Hive Alive 2014
New extras collection, Hive Alive Moments, including...
Too Hot
Perfect Marriage
The Hive Before Halloween
Take Two
Shy My Heart

Featured May 24th, 2014 and on every chapter release since then.

Art by BlackWater (that's me)

Life is full of surprises. That is a known fact. However, you always expect some kind of minor surprise, like your train arriving a little too late, or your ice-cream having vanilla taste rather than strawberry. But sometimes, life will give you surprises you could never predict. For Fluttershy, it was three little foals. But not her own foals, or even orphans. Three little foals that used to be her and her friends' most fearsome and dreaded foes.

Sombra, Chrysalis and Nightmare Moon.

Will Fluttershy's nerves survive this onslaught of misadventures? Will she keep the three villains hidden? Will she even become friends with them? Why do I sound like a narrator to a bad criminal drama? Don't think or try to answer those questions, just go ahead and read!

Edited by: MessoriaAQ, Cerulean Voice, Gidget_TheGear, Twilight Fashion

Cover art by amazing Missangest!

Cover art got featured on Drawfriend in EqD!
The story itself got proudly rejected by EqD!

After the defeat of Queen Chrysalis, the changelings left behind don't know what to do. They eventually decide to seek the one who defeated their queen and make her theirs. What really goes on in a changeling's head? Can Cadence handle the vile creatures without prejudice? What do the crystal ponies think?

Teen due to cursing, only references to sexual stuff, and cursing

As a young adult, Sebastian was having the time of his life. He had his own small group of friends, a loving family, and a clean home in a nice neighborhood.

Key-word being "had".

After the accident, he finds himself in a different time, a different place, and, most importantly, a different body.

Hey everybrony, just jumping on the bandwagon here.
Tags and characters will be added as the story progresses.
Why yes! I DO suck at descriptions!

Edit: 6/8/2014
I got featured.
I'm crying right now oh my god help me