It has been several months since the disappearance of Twilight Sparkle..

One night, after watching her sister raise the Moon and set the heavens alight, Princess Celestia begins to bed down for the night, only to be interrupted by portal forming in her room. From out of the portal comes none other than Twilight Sparkle, garbed in strange armor.

Princess Celestia, along with Luna, Cadence, and Shining Armor, are overjoyed by the Element of Magic's return, but are justifiably curious as to where she had been and what she had been doing. And so, Twilight begins her tale. A tale of survival against impossible odds. A tale of a people fighting for the most basic right of all sentient beings. The right to exist.

Both Link and Epona race to fight evil once again, however once they make it to the thing that is behind all the monsters that roam Hyrule, they get a big surprise. Once again, Equestria is threatened by evil and Link is once again called to the line of duty. Isn't he?
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[NOTES]
I will add tags as I go along.
Cover image was made by Aeroflyte on DeviantArt, which can be found here, go check him out.
Now edited by these people: m2pt5 and Crescent Quills!
Based off of the Ocarina of Time timeline (which includes Majora's Mask), but takes a few aspects from Twilight Princess.
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This story is a sequel to Kind Hearts & Coronets

“My name’s Daisy Jo Martinez. I was born – or so my birth certificate says – on March 30, 2012. I’m married with two kids, my husband’s a Naval officer. I’m originally from a town just outside of DC called Winchester, Virginia – apple capital of America, yay, go me. I’m a Republican – that tends to shock a lot of people – and I’m a practicing Catholic – and that tends to shock more people than the first, and like I said, I’m married – I think people start passing out at that point. I've lived a happy, charmed life and I’m proud to be an American.

“And as you can also see, I’m a pony. Well, physically anyway."

The first main story of The All-American Girl Saga.
TV Tropes page
Selected as "Humans Aren't Bastards" Group's Mods' Choice July 2013

When Sgt Castle drops into strange new land, he has to cope with both his nightmarish past that had followed him to this peaceful land, and his uncertain future as he finds himself developing new friendships. All he truly wants is to return home, but is that the best option, or is it not even an option at all?

The Princesses find an alien creature barely clinging to life at the scene of a terrifying crash. Can the Combined Power of the Elements of Harmony save it, or more importantly, should they save it? Will the arrival of this strange creature tear Equestria apart?

TV Tropes
https://tvtropes.org/pmwiki/pmwiki.php/FanFic/Article2

The year is 2806, and Humanity has long left the loving embrace of their planet. After defeating the fanatical Enlightened, a warmongering alien race who had come to destroy them, many thought that an era of peace and prosperity was to come.

But that was not the case. Earth was lost in the war, and Humanity was divided.

A galactic civil war is raging in the galaxy, and three notorious pirates seeking to leave that life depart on a voyage to find the long-lost homeworld of Humanity: Earth. But complications arise as their destination is far more colourful, and far more occupied than originally expected…

Follow the tale of the Cerberus Pirates, and their struggles on a foreign world with nothing but the technology on their persons and the wreck of their ship to work with. Striving to get back to Mother Earth, and doing whatever it takes to achieve that goal.

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[Gore tag is more of a warning that things get a bit intense, but not to a sickening degree. Merely a word of caution, as it were.]
[The Team: Dumbgamer99 (Slayer), SovietBacon (Yuri), and Shadow Horizons (Drake)]
[Current Beta-Readers (thanks a tonne, you guys!): Rokkurin, PhiliChez]

My name is Simon "Ghost" Riley. I was part of Task Force 141, an elite group of soldiers composed of the best of the best. Our mission was to take down Makarov, the mastermind of Russian invasion of America. The team consistered of myself, Roach, Ozone, and Scarecrow with sniper support from Archer and Toad. We didn't find Makarov, but we did find a jackpot of information. On our way to the landing zone, Ozone and Scarecrow were killed by mortar fire while me and Roach managed to survive. I dragged him all the way to the LZ but fate had other plans in store for us, specifically death at the hands of our own commanding officer. Shot point-blank, the shock and blood loss made my vision blur as everything went dark. I couldn't feel my body or when I hit the ground, but I could smell the scent of something before flames engulfed the world. I tried to resist Death's offer, but in the end, I gave in. I welcomed his embrace, hoping that I'd finally find peace.

Instead, here I am, alive and kicking in a world full of bloody ponies.

The magic of friendship flows through every creature, big and small. They just need a little push in the right direction. Tired of living under their masters' neglect, insanity or just plain monotony, the pets all desire (in one way or another) to take life in a new, more exciting direction.

When a mysterious curse is laid on the Elements of Harmony, turning the bearers into pets and their pets into ponies, the misfits embark on a dangerous trek to break it. What was originally meant to be a quick trip around Equestria turns into a harrowing journey that expands from the comfy suburbs of Ponyville to the forgotten ruins of an underground kingdom to the biting tundra of the north, all filled with odd characters, laughter and an evil that has lasted for generations as the pets each embrace their inner hero. Because as we all know: the greatest of legends always start with the smallest beginnings.

Story Theme: Matthew Perryman Jones - Swallow the Sea (Pt. 2)

*Guys, I appreciate every bit of feedback I get, but can you do your best to be constructive? I'd like to know what I did right, what I did wrong, and where I can improve so that this story could be at its best.
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Thanks go to the beautiful MrJoshy, Rainbow Bob, Vexy, Astrocity, Skeeter the Lurker, and funkyferret for editing and reviewing.

Credit for image and title go to Shawnyall and Equestria-Prevails

SG-1 is sent through the Stargate as a forward scouting team for an extended scientific mission to P3X-597. Arriving in a long abandoned castle, the team heads out for the nearest village. As they approach, it becomes clear that the locals aren't exactly human. Their contact with the pony-like aliens goes well, conveniently timed alongside a celebration of the sun, until an over-the-top, hammy, evil pony appears to ruin the festivities.

A Stargate SG-1 crossover.

((The idea from this story was taken from chapter 12 of Gravitys Rainboom fantastic story: MIA. I've talked with the author, and he allowed me to write this story, since I feel as though it will be somewhat similar.))

This story has been cancelled! You can discover the ending (last story on the page) HERE

They say that Spartans never die; that they're only missing in action. But can that really be true if you don't feel alive? If the very purpose of your existence is suddenly taken from you?

Noble Six detonated the rigged slip-space drive on the Covenant corvette as Jorge-052 simply floated back down to Reach, gripping her dogtags tightly.

To Reach, Jorge, and the UNSC, Spartan-B312 is gone; whether it be KIA or MIA.

But to Equestria, Noble Six is anything but dead...