Discord is beaten, but it's the scars you can't see that take the longest to heal. Let us begin. The mane six, along with all of Ponyville, has to deal with the emotional damage done by Discord's day of chaos. One by one the heroes (and every other pony in Ponyville) must look into themselves and find the strength to face the flaws in their hearts that Discord exploited and become stronger for it.

Laughter, tears, smiles, actions, adventure, frights, darkness and light and heart-warmings ALL await you!

The Audio adaption Is here: http://www.youtube.com/watch?v=0GqJMx6kYyU&list=PLABD0AEFCD46D56DA&feature=plcp
ORIGINAL fan-art, ORIGINAL fan-music and VOICE ACTORS galore await!

I promise this will be one ride that will not disappoint.

First up is Fluttershy and for her there are no loose ends what so ever. . . . Or are there? Saying anything more would be spoilers!

Recursive fanart and fan stories are here. http://alexwarlorn.deviantart.com/journal/MLP-FiM-Pony-POV-Series-Fanworks-audio-adaption-274110361 Many are rubber stamped by me as optional canon stories that reveal some of other sides of these stories.

Tropes page found here. http://tvtropes.org/pmwiki/pmwiki.php/FanFic/PonyPOVSeries

Two thousand years after the return of Princess Luna, Equestria's technology and magic has advanced far enough that the once far off dream of faster than light travel is now a reality.

And that reality is the ES Harmony, the pride of its designer, Princess Twilight Sparkle, and Equestria's first FTL capable starship. It is due to make its maiden voyage to travel further than anypony before it.

And yet when they receive a distress call from origins unknown, this ship's maiden voyage will become one the crew will never forget.

(Featured on 31/7/2016)
(Not a strict crossover with Star Trek, but here Equestria Girls takes place in the Star Trek Universe)

Apparently, science isn't exactly perfect. Even when it's done by the likes of Winston and his genetically enhanced brain. It's just my rotten luck that when it does screw up, it leaves me separated from Earth entirely and completely unable to fulfill my duties as an Overwatch member. But where I end up really did need more heroes.

First I end up having to deal with a war between humans and robots, then I get involved in alien crises just as crazy. Hmph, good for them the cavalry dropped in!

Twilight Sparkle never seemed to notice Lyra Heartstrings. She didn't even remember Lyra's name.

They were friends back in Canterlot and even went to school together. Yet Twilight didn't notice that Lyra just happened to move to Ponyville the same day she did. She didn't even notice when Lyra appeared at her welcoming party. Nor did she ever seem to spot her old classmate passing by in the background on any other day during her stay in Ponyville. Some days she could look right at Lyra and never realize that they knew each other.

Lyra isn't a very noticeable pony. She has put a lot of effort into that.

Set in late season 5, after Amending Fences.
Note: Lots of spoilers in the comments.

There is a hidden village deep within the untamed forest surrounding Neighagara Falls. Should one ever journey to this village, those who live there will welcome them for a simple price: love.

When the village accepts a new family from Cloudsdale, a not-quite-altruistic pair of changeling siblings offer a young filly friendship and a chance to find her place in the strange village she hopes to call home.

New cover art done by Arcticwaters.

Megan Williams had no big goals in life. Just to take over the family farm from her father. Then one day, her entire life is thrown into chaos when she finds herself transported to another world, full of magic and mythical creatures. A world where her very presence could threaten the precarious power balance that has existed for a millenia, for once there, she finds herself caught up in a political game of cat and mouse that threatens to plunge the world into war.

G1 MLP / G4 MLP Crossover

Special Thanks to Kevin Lee and Page-Mistress for their fantastic job of editing and proof reading.

Spin-off by Natomon01: Here

Princess Celestia and Princess Luna. Immortal rulers of Equestria, shepherds of the Sun and Moon, and arguably the most powerful beings in existence.

Even they are not immune to the dreaded rivalry that comes between sisters. Feeling her sister has gone soft over the millenia spent alone, Princess Luna challenges Princess Celestia to the one and only Iron Pony Competition.

Which sister will come out on top?

Now with fanart! By Soulite1110

A drop-out mage that meddles in things forbidden should take care not to be caught, and if one is, the last thing you'd want to get caught by is a trickster god with a sense of humor.
Add a unicorn lost in limbo in need of help getting back home, and the beginning of a journey fraught with danger, mystery and trickery is set. A journey to find the way to the ultimate goal he's been chasing for years, but which can only be found if he learns the answer to the question of what it means to be a trickster.

A clerical error in the Registry of Mortals sends an unwitting human to a strange land. It wouldn't be so bad, if the ponies there weren't out for his blood.

Literally.

A little twist on the myth that unicorns were hunted for their fantastical powers.

Now that Earth and Equestria have made contact, lots of ponies dream of visiting Earth, and while tourist visas are hard to come by, a few lucky students each year can participate in a foreign-exchange program.

Silver Glow is one of those lucky ponies.

She thought she was prepared for Earth, but can you ever be fully prepared for a truly foreign exchange?

Link to the dramaturge