Some great under-appreciated stuff you should check out

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  Moondust Three weeks have passed since Nightmare Moon's defeat, and Twilight is still in Canterlot... by Parallel Black 28,750 words · 24 · 2
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  Brave New World Twilight wakes up two-thousand years in the future on a salvage boat and finds out that Equestria is gone. With a tyrant ruling the land and Princess Celestia nowhere to be found, she must join new allies to survive this strange new world. by Enter Madness 17,648 words · 139 · 3
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  Thanatos' Creed Rainbow Dash ends up in a pretty bad storm. Turns out that the storm sent her to a place of insanity, desperation, and a man named Aeron. by Shadowflash 52,872 words · 418 · 35
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  Harmony in Force A lone Republic cruiser stumbles upon an uncharted planet occupied by colorful equids.... but as events develop, all is not as it seems.... by Khandnalie 22,982 words · 49 · 1