Story number one of the Twilight is Magic series. See the author notes in the first chapter for a link to the read order.

Twilight is the bearer of the Element of Magic, or is she? is it possible that the logic is in reverse? Twilight must learn that every action has consequences. Some are more damning than others even in the best of intentions. But with the power to save someone you love, can you honestly say you would do any different?

This story takes place approx six years after the first episode, Friendship is Magic part one. (Five years after EQG)
Eventual-twidash (this should go without saying for a story written by Twidashforever)

it is said that stories are never truly finished, only abandoned. I have not abandoned this story, as such, if you see something I did wrong, please point it out. I will still make changes as needed.

NOTE 10-18-15: Revisions are in progress (Thank you, The Derpy Writer), revised chapters will be labeled as such with an (R)

This story is a sequel to The Chaotic Touch of Harmony

It has been nearly a year since ponies and Mions appeared on Earth with humanity being divided in how to deal with both. While the ponies in the newly formed town of Trinity work to establish themselves, the rest are scattered throughout the planet while trying to find their place in the world and the Cult of the Koridost is quietly ramping up their genocidal campaign against humanity.

Will Discord’s vision of humanity’s ruin come to pass? Or will his less than direct intervention allow the planet to see a brighter tomorrow?

It is highly recommended to read the first arc because this is a direct sequel and many plot elements may be confusing without previously established context.

Again, thanks go out to Quite Quiet for his editing work.

Excellent cover art by Tulip

[Please read the author's notes after the expansion before reading. Thank you]

Welcome to the new Equestria, Twilight Sparkle. See your friends at each other's throats? You have to choose between them now, to stop the heartache of war with decisive victory. For the nation lies bleeding, its harmony shattered into a million pieces. Black and white and right and wrong have blurred together.

You must choose wisely, or all shall die.

~Image by JohnJoseco~ If anyone can find a fitting, unique image for this story, please do not hesitate to link in the comments.

[Author's Note]

The following stories should be read in order to get a good grasp on references to previous works.

- Sunset (Mandatory)*
- My Little Muffin (Optional)
- Clash of the Heavenly Titans (Optional)*
- Blood is Thicker / The Reluctant Reunion of the Redoubtable Rabble-Rouser (Strongly Recommended)

All can be found on my Deviant Art account: http://ciroton.deviantart.com/
Those with * can be found here on FIMFiction.

Due to the recent animal activity from the Everfree Forest, Princess Celestia has sent an agent from The Academy. What will happen when a certain librarian starts to fall for the crimson haired warrior? What secret is he keeping from the town folk of Ponyville? Join Crimson Storm on a journey that will shake the foundation of the world.

All ponies are humanized. Pegasi still have wings and Unicorn's cast magic with their hands.

Inspired by Gentlemanj's amazing series. 'The Journey of Graves.' and RoosterTeeth's RWBY

Before King Sombra enslaved the ponies of the Crystal Empire; before Nightmare Moon attempted to block out the sun forever; there were only Luna and Sombra. In a time when Equestria’s peace after Discord’s defeat is shaken, and when alicorns once again come under attack, two unlikely ponies come together beneath the pale moonlight. In the darkness their love blossoms, but so does an ethereal evil that bides its time, waiting to strike before the dawn.

______________________________________
Sequels:
Shadow of the Moon
In Your Dreams: Luna's Farewell

Cover art done by the amazing Nalesia on Deviantart. Please check out the artist's gallery. I couldn't be happier with this piece.

This story is a sequel to A Stitch in Time

Having discovered the message left for her by Star Swirl the Bearded in the distant past, Twilight once again finds herself caught up in the middle of a struggle against forces far greater than herself. In order to even stand a chance she'll need to travel further and wider than she ever has, and forge some unlikely alliances with old enemies. All to bring down the powers that have manipulated and shaped her entire life, and retake control of her own future.

The conclusion of the Time Loop Trilogy, which began with Hard Reset
Available in Spanish thanks to dgs1993
Series TV Tropes page

Trixie and Twilight decide the time is right to finally, finally, explore the wonderful magic of intercourse, and together they share a very special evening.

(Cover art found on Google, from Yurifanboy67 on Deviantart)

This story is a sequel to Shadow Pony

After centuries of peace, the unthinkable has happened: the dragons have invaded Equestria. Celestia knows that her country could never survive a war against these terrible beasts, and so journeys south in hopes of bringing a quick peace. She is not the only one seeking answers: the young assassin Fine Crime has been dispatched by the Archons to determine exactly what has stirred the dragons into action, Fancy Pants has found himself on the front lines with no idea if he'll make any difference, and Fleur Purpurnyj has more enemies than dragons to worry about.

Nothing could prepare any of them for the sheer brutality of the Burning Lands' most fearsome inhabitant: the dreaded Reddux the Tyrant.

A prequel to No Heroes set roughly 7 years before the beginning of the show. Sex tag is for thematic elements only.

Pre-read by Majora. Edited by Danger Beans.

Cover art commissioned from viwrastupr.

Now with a review by Cerulean Voice!

The No Heroes Series
Chronological from Top to Bottom:
Shadow Pony
Reddux the Tyrant
No Heroes Part I - The Roster
No Heroes Part II - The Journey Home
Lightning's Bolt
No Heroes Part III - For Dreams
No Heroes Part IV - The Crystal Empress
No Heroes: Beyond the Everfree
No Heroes: Life of Pie
No Heroes: Hot Chocolate at the Isekai
To My Uncle

The Fleur-Verse
Chronologically from Top to Bottom:
Shadow Pony
Reddux the Tyrant
No Heroes Part I - The Roster
No Heroes Part II - The Journey Home
Lightning's Bolt
The Weed
The Challenge of Fleur
Ordinary World
A Challenge for Fleur
Sweet to Eat: Tales of Nightmare Night

This story is a sequel to Past Sins

Hearth's Warming is a time for friends and family to come together, celebrate harmony, and welcome the new year. Nyx is looking forward to just this as she rides the train to Canterlot with Spike and Twilight. She's going to meet her extended family for the first time and wants nothing more than to make a good impression. Yet, the sheen of the holidays can't hide the trouble caused by meddling grandparents, relentless reporters, and a paranoid uncle.

Twilight isn't having a very good day. An experimental spell blew up in her face, an army of changelings is attacking Canterlot, and she just died. Yet somehow, it looks like it's going to keep going downhill from here.

Given the chance to correct what's gone wrong, Twilight swears she's going to fix all this even if it kills her. Which it will. Frequently.

Cover art by Pixel Prism
Spanish Translation
Series TV Tropes page