Chrysialis is back... and completely insane.

The changeling that once aimed to take over Equestria vanished after her plans were thwarted. But now shes back, with a somewhat altered agenda. She's become mentally unstable and is beginning to loose control... or is she?

What has driven Chrysalis to this point? What horrifying plans does she have in store for the mane six?

This story is a sequel to Hard Reset

After the events of Hard Reset Twilight's life and mental well being are slowly returning to normal. Her recovery is cut short, though, when a letter arrives informing her that the time loop spell she cast is causing severe damage to space and time itself. In over her head, Twilight tries to summon anypony who will know how to fix it. The pony she gets is the last one she ever thought she would meet... and nothing like she expected him to be.

Available in Spanish thanks to dgs1993
Series TV Tropes page

An alternate universe story, in which Twilight Sparkle was born a pegasus, not a unicorn. Because of this, she isn't Princess Celestia's personal student at the School for Gifted Unicorns, and she can't wield the Element of Magic. Can she still help save the world from Nightmare Moon? Or will she fall under the dark powers of nightmares?

This was somewhat inspired by Rainbooms and Royalty, a story in which Princess Celestia picks Rainbow Dash to be her personal student.

When Ditzy Doo loses her job at Cloudsdale Mail and Freight, she gets a job at another shipping company... only to find out their definition of shipping has nothing to do with delivering packages! Desperate for income to support herself and Dinky, will Ditzy be able to make it as a pony matchmaker?

(Occurs between Seasons 2 and 3 of the show.)

This story is a sequel to Order from Chaos

Worker has found happiness, health, and most importantly, home. Now he struggles to defend those who made his new life possible while he wrestles with his own demons.
A belated sequel to Order from Chaos.
Concluded in Hope.

The Princesses find an alien creature barely clinging to life at the scene of a terrifying crash. Can the Combined Power of the Elements of Harmony save it, or more importantly, should they save it? Will the arrival of this strange creature tear Equestria apart?

TV Tropes
https://tvtropes.org/pmwiki/pmwiki.php/FanFic/Article2

Newly married Princess Cadance and Shining Armour return home after their honeymoon happy to be home again and ready to help out around the castle however they can. However, when Cadance discovers a small creature hiding in her room, she has a choice to make. Turn the changeling in to the royal guard or keep it a secret.

Warning: This story is made mostly for Dwaaa'a and will likely hit you in a feel or two.

It could have been just another night. Instead, Vinyl Scratch leaves a show to find herself suddenly presented with a chance to make a difference in the life of a filly no one else will look twice at. Now if only she can convince Octavia she's not making a huge mistake...as usual.

Note: This story now has an indirect sequel set several years in the future in The Most Unlikely Places. Cover art by SonicDash777.

Twilight writes to Princess Celestia for an explanation of an insidious issue Shining Armor told her about... but she ends up finding a secret that will change her life forever.

Short and thoughtful, with just a little pinch of humor to liven things up.
Simulcast en Espaniol
Many thanks to my proofreaders and pre-readers, Kolth, Sky Warden, and Colt, all from MLP Forums.

In 2185, during his campaign against the Collectors, Commander Shepard discovered a previously unknown species whose origins predated any other race in the modern galaxy. Following a daring rescue from their ancient sanctuary, the Equestrian Herd was brought back into the galaxy where, for the first time in eons, they must walk their own path.

Knowing full well the terrible threat that lingers on the edge of the galaxy, the leader of this newly freed race fights to secure her people’s future while attempting to prepare for the storm on the horizon.

This is her story.
------------------------------------

The long awaited Sequel to Mass Effect 2: The Equestrian Equation This is a reader directed story. Your choices will shape events.
If you favorite, also like! It's one little button click that makes all the difference.

Also, this series has its own TVTropes page now! (Special thanks to user CrowMagnon for setting it up).