This story is a sequel to The God Empress of Ponykind

One thousand years ago, Luna, Warmistress of Equestria and sister of Empress Celestia, fell to the powers of Chaos and plunged Equestria into a brutal civil war. The Traitors were defeated, but not before Luna made the ultimate sacrifice and was sealed away in the Immaterium with only the soul of a slain Primarch to keep her company. For a millennium she has been locked away, waiting for a chance to return to her home and her sister.

Now, she has been freed from the Immaterium, and as she takes her first steps in a new Equestria, one ruled by the powers of Harmony, only one question remains:

Does Equestria still need the services of a Warmistress?

Comments may contain spoilers. YOU HAVE BEEN WARNED!

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This story is a sequel to The God Empress of Ponykind

A message rings through the Warp: "The Game is broken, only Destruction remains". Celestia hears it, fearing for the lives of her former subjects and those of her beloved ponies. Unwilling to sit idle, she has chosen a dangerous path: return to the Imperium, take up the mantle of Emperor of Mankind, defeat the coming storm, and save Mankind once and for all.

With Twilight Sparkle to aid her, Celestia faces new challenges and new enemies. Her forces are scattered, her people assaulted, and the enemies of Man grow stronger with each passing day.

The Time of Heroes is gone. Now comes the Time of Ending.

Sequel to God Empress of Ponykind. Reading that first is strongly recommended.
Rated T for 40K related violence, but that might change at some point.
Comments contain spoilers. You have been warned.

So, you think you know Equestria just because you watch My Little Pony? Well, I can tell you, the show barely scratched the surface. The name's Shirotora, and I'm one of many humans that call Equestria home.

Of course, where most humans find themselves in the form of a pony, griffin, minotaur or some other regular race, I happen to have the form of the servants of an ancient tyrant god that were sealed away along with their master thousands of years ago.

Yeah, that didn't go over very well with Celestia.

This is the story of my adventures in this crazy world of not-so-cartoonish ponies, along side a colorful cast of friends, including a crystal pegasus from Seattle, an eight hundred year old dragon-pony, a demon blacksmith looking to get contracts with mortals, and the worlds luckiest/unluckiest mare... Oh, and the Mane 6 are in there, too.

Together, we'll figure out why the hell predators are getting more violent, and why more and more monsters are suddenly popping up everywhere.

I just hope it doesn't have anything to do with some ancient, long-banished evil coming back...

It does, doesn't it...

Dammit.

This is a complete reimagining of my first successful story, Chaotic Harmony. While it will share some characters and events with the original, this is going to be an entirely different experience.

To those of you who loved the original, I hope you love this just as much. To those who didn't, I hope you find this an improvement.

Also, to those who have been following Children of Chaos, that story will also be reworked a little as a sequel to this, not the original.

Note: While this is not a true AU, there will be some pretty major deviations from canon. There is no AU tag because all major plot points in canon still happened in this fic, though the details of how they played out may have changed, and most changes could be wedged into the show's canon. There's also a little bit of 'dark', but not too much.

Basically, this was made as if the show was the kid friendly version of what happened.

After the Changeling invasion, Celestia and Luna make the decision to have Twilight investigate the Elements of Harmony and solve the mystery of their power.

A thousand years later, Rainbow Dash awakens in a world she does not recognize. She has no idea how or why she came to be there. She does not know the language, the geography or any of the rules of this new time. She soon finds allies in Star Fall, a scholarly pegasus whose Talent is Magic, and Astrid, Star Fall's Griffin guardian. Together they set out to discover why Dash has been sent to the future, and how she might return to when she belongs.

War threatens the nations, a Nightmare stalks the shadows, and Rainbow Dash's arrival has turned her into a wild card in a deadly game that pits the law on both sides of a broken Equestria against a mysterious criminal figure, Max Cash. Yet the stakes are higher than anyone knows, for in her research Twilight Sparkle discovered a dark secret about the Elements, something that will shake the foundations of the world.

Cover image by SierraEx
Has a TvTropes page

Twelve thousand years ago, humanity was driven into a war with an unknown enemy. Fire rained from the heavens and the sky turned dark as the sun dimmed. Acid poured from the clouds and a plague was unleashed upon mankind: A virus that caused men to turn on one another. A disease that forced man to fall to his knees and beg for mercy. A pathogen that ravaged man’s civilization.

And when humanity lost all chances of reconciliation, all hope of keeping their loved ones safe, they pulled the plug, three hundred souls left Earth while sacrificing their only home to the angel of the enemy.

In the twelve millennia since the Great War, all traces of humanity have been wiped from the surface of the Earth. In man’s rightful place now are a multitude of sapient species. For twelve thousand years, these animals have lived in peace and harmony, man reduced to nothing more than but a myth, a folk tale, a legend.

But word has spread across the countryside. Word of forgotten beasts that still walk the western wastelands. Creatures able to bend the world to their will without the help of magic. Creatures said to be older than time itself.

Teen for language, and dark moments. Character tags will be added as the story progresses

This story is a sequel to Letters From a Friend at the End of the World

Her travels having brought her and her friends to the far-north city of Frostvale, Trixie finds herself caught up in a looming war and a dangerous plot. Still just trying to recover, she decides to lay low for a bit and wait for an opening to continue her journey.

Meanwhile, Twilight and friends continue following the trail Trixie left behind on her way north. By a combination of her letters, and the ponies they meet, they follow in her hoofsteps, discovering a number of surprising secrets along the way.

Thanks to both Belligerent Sock and Themaskedferret for pre-reading and editing.

This story is a sequel to Into the Black: A Mare's Tale

Don't forget to check out the other part of the collab, Grey Hat

It has been one year since the invasion of Avol failed and the subsequent surrender of the dratali. Since then, the galaxy has seen peace like that which many had never seen. The races of Avol have been in negotiation with the races of the Alliance of Sapient Races. Now, Twilight Sparkle, her friends, and a few others are leaving their homeworld. While the others leave to forge a path in the stars for their fellow pony, Twilight returns to Earth with her boyfriend, Curt, to begin a project of her own; a guide to help ponies better adapt to very different culture.

Not long after their arrival on Earth, though, her plans take a dramatic turn. Between Curt's proposal to the discovery that humans have been developing magical abilities, the nightmare pony has her hooves full. No matter what, though, she was determined to come out on top, publish her book, teach a new race magic, marry the man of her dreams, and prove that even a nightmare's dreams can come true.

Cover art by PhiliChez

What starts out as an ordinary afternoon for Twilight Sparkle and Rainbow Dash quickly turns deadly, as forgotten schemes of vengeance awaken and come to fruition. Rainbow Dash will learn the true purpose of the Wonderbolts, what it means to be a hero, and what it costs.

Colgate has to deal with nasty Ponyville teeth all year long. So far the only break she has had is from Spike and the Princesses. When Fleur De Lis visits Ponyville she is given a near royal treatment. Although strangely enough she only visited the small town to see the dentist. A dentist far away from the elite of Canterlot...

Upon seeing the super model's teeth Colgate realizes that she is in love with Fleur's mouth. Every incisor, molar and even her gums. The desire for Fleur's mouth flourishes into a desire for the pony herself. How will Colgate reel Fleur in?

Dental cleanings of course.

Twilight Sparkle never was a Unicorn and she didn't even know it.
What happens when her true heritage comes to light? Will she willingly embrace it? Or will she be forced to?

Beware of spoilers in the comments!

Edited by uTTerAbsurdity, Zervziel, Stormwatch and Gwenio

Cover art by the talented Cartoonlion and colored by the equally talented Stormwatch, original can be found here

Click here for the Tvtropes page