This story is a sequel to Lines and Webs

For four long years, Celestia's apprentice Twilight Sparkle, once a model pony and a hero among heroes, has waged a bitter and secret struggle with her onetime mentor. Though she works from the shadows, directing her forces from the Old Capitol in the Everfree Forest, Twilight Sparkle is unable to gain any advantage,

Likewise, Princess Celestia finds her once-faithful student far more cunning and elusive than she had anticipated, and even now searches for a way to bring Twilight Sparkle's rebellion to its knees.

It is a game of greys, of knives in the dark and of poisoned wine, where pawns are moved and traded and exchanged for greater advantage, all the while drawing both sides nearer to the conflict which shall tear Equestria in two.

At the center of this conflict is a new pawn, one who only wished to see the truth for herself. Drawn into a deadly game whose rules she does not understand, Sweetie Belle must learn to survive in a world where all is darkened, and nopony can be completely trusted.

Because when gods play chess, all pieces are expendable.

A nation will crumble, old enemies shall return in the most unexpected ways, and regardless of who is victorious, only one thing can be certain.

Nothing shall ever be the same.

Followed by Stormsinger.

It has been ten years since the defeat of the Changling Queen, and Equestria is again at peace. Twilight Sparkle and the Elements of Harmony have reached their prime, and have begun to settle down. Love and life abound in Ponyville, especially for Twilight's friends, but she has nopony to call her own.

There is a reason.

A series of events lead to a horrible revelation, and Twilight is thrust deep into a terrifying web of secrets and lies. Her peace is over.

This time, however, she won't be fighting monsters or madponies. What she faces will be much, much worse.

Act One of Two.

Act Two is here.

Currently undergoing editing by the wonderful Mstar!

You think you know me so well, don’t you? I’m a spirit of chaos, and nothing else. You don’t even know the half of it! Sit back and indulge me for a little; I’ll make you understand what it truly means to be chaos itself.

(Featured on Equestria Daily: July 16, 2012.)

Shortly after her coronation as the new Princess of Equestria, Twilight is visited by a creature she never expected to see in person. What's even more unexpected than the identity of this petitioner, though, is his reason for coming.

Maintenant en Français grâce à la traduction merveilleuse d'Acylius!
(Now available in French thanks to the wonderful work of Acylius!)

_{Partially inspired by the Imposing Sovereigns II contest under the prompt "Twilight/The Old."}

When Ruby boards the first trans-oceanic flight in Equestrian history, the last place she expects to end up is stranded in the middle of Eternity's Crossing in the wake of a horrific zeppelin crash. After a mysterious tower leads her and a fellow survivor to discover a twisted and fragmented city twenty thousand feet below the surface of the ocean, though, a bit of fire and smoke is the last thing she needs to worry about. Between the horrendously disfigured residents and the paranoia of the madmare who once built and controlled it, daily survival in this corrupted utopia is anything but a guarantee. But with the help of some new friends and a few genetic enhancements, Ruby isn't going down without a fight, and in the process might just discover that the deadliest weapon in Harmony is herself.

An adaptation of BioShock for the world of MLP. Written to be comprehensible to anyone, regardless of whether they've played the original game.

This story is a sequel to Freeport Venture: Come And See

When Twilight Sparkle traveled through time to stop Starlight Glimmer, she had no idea of the wider consequences of their actions. By trying to restore her old world, she was also wiping away the new ones that Starlight's changes to the past had created. Now, the last remnants of those destroyed worlds have come for revenge.

Co-authored by Ponibius

Their camping trip to the Everfree had been through some ups and downs, but Twilight and her friends nevertheless return home having enjoyed it. However, as they enter the Friendship Palace, they're shocked to discover an intruder within. A mare with a very familiar face, who has come to them after having escaped a gruesome fate. But, if that were not surprising enough, then they're truly taken aback when this newcomer explains why she's here.

Young Luna has just learned to dreamwalk, and she has big ideas what to do with it. She wants to play with her big sister, she wants to join the Research Mages, and she wants to even help Princess Twilight -- but Headmaster Spike has other ideas for her to focus on, like friendship.

[Part One of the Riflepony Series] When an unexpected heat wave scorches Appleloosa, Braeburn finds himself unable to save his family's apple orchard. That is, until he meets a certain pony whom he thought to be fictitious. The mare tells him of a treasure that is said to be buried in the town of Dodge Junction, and asks for his assistance in finding it. Will the tales of Cunning the Colt's treasure prove to be true, or were they simply folktale?

Proofread and edited by JohnPerry.

Lazy Pines is a small town in the high country of Colorado, easily overshadowed by the bigger sights to see along Colorado State 9. When influenza strikes the town hard, it is little more than a statistical blip in a typical flu season. No one thinks any more of it as the initial wave of infection passes ... until the other symptoms begin to manifest.

Meanwhile, during what should have been a routine trip to Canterlot, Twilight Sparkle stumbles upon a strange anomaly which turns into an all-consuming mystery. As she discovers the complex web of magic stubbornly maintaining this mystery's secrets, she grows worried what it could mean for herself and her family.

And as the residents of Lazy Pines struggle to understand -- or even believe -- what is happening to them, two worlds have irrevocably been set on a direct collision course.

Updates every other weekend.

Cover art by Mix-up. Please check out more artwork by this talented artist.

Now has its own TV Tropes page thanks to redandready45.