*Taking place during and after the events of Legend of Everfree*

A month has passed since the Friendship Games. Old stigmas are finally breaking down at Crystal Prep but Sunny Flare isn't convinced that these current events are natural. Naturally, she decides to investigate herself.
But upon certain discoveries that she and eventually the rest of her friends uproot, they realize they may have bit off more than they could chew. However, they do happen to know two people who they consider "magical experts".

Edit: I know this is late but I can't believe this story actually got featured. Thank you very much!

Sunset hesitantly lets a very enthusiastic Princess Twilight take her new cellphone through the mirror, so that Twilight can study it in Equestria.
It does not work. At all.

*Featured 1/5-1/8*
Thanks, everypony!

She's an ally of justice!
With powers of the sun, she smites villains that plague this world and rescue those who fell victim to their evil ploy!
She is

Magical Girl Sunny!

No matter how much she denies it, she is Sunset Shimmer.

...unless, it's not her? But then, who is she?
---
Set in between Friendship Games and Legends of Everfree.
Edited by the ever helpful docontra.

The chapter titles do not reflect the content- it's not an anthology of anime parodies (no, really, it isn't).

Lazy Pines is a small town in the high country of Colorado, easily overshadowed by the bigger sights to see along Colorado State 9. When influenza strikes the town hard, it is little more than a statistical blip in a typical flu season. No one thinks any more of it as the initial wave of infection passes ... until the other symptoms begin to manifest.

Meanwhile, during what should have been a routine trip to Canterlot, Twilight Sparkle stumbles upon a strange anomaly which turns into an all-consuming mystery. As she discovers the complex web of magic stubbornly maintaining this mystery's secrets, she grows worried what it could mean for herself and her family.

And as the residents of Lazy Pines struggle to understand -- or even believe -- what is happening to them, two worlds have irrevocably been set on a direct collision course.

Updates every other weekend.

Cover art by Mix-up. Please check out more artwork by this talented artist.

Now has its own TV Tropes page thanks to redandready45.

Twilight Sparkle lives in the ideal world of Equestria. There, she is a pony, strong and proud, surrounded by friends, and with only studying as her job. Though some may try to mock this, as the student to the princess of this land, she is revered as one of the smartest and most amazing mares in the world. She even has the honor of defending the land, and going on adventures few even see in their dreams.

It is these dreams that for five years, Celestia has recorded, while looking over the human known as Twilight Sparkle.

Co-Write with Jumbled Thought

During an otherwise ordinary bus ride on the way back from the Friendship Games, Indigo Zap and her friends reflect upon what they have seen and experienced.

Until one of them has an unsettling realization about the very moral fibre of their characters.

Rated Teen for mature language.
Special Thanks to SolidFire for his editing work.
Cover image by the talented Uotapo
Story inspired by the works of Mitchell and Webb

As a bright and promising student entering her senior year at Canterlot High School, Trixie Lulamoon thought she was prepared for many things... the least of which was being magically summoned across dimensions by her equine doppelganger to perform an all-important task. A bit of a warning would have been nice. Some clothes would have been nicer.

A magic experiment strands Starlight Glimmer in another world, with no way to get home.

There's only one thing to do in this situation: learn a friendship lesson! Oh, and have some lunch. Okonomiyaki, to be precise.

A crossover with one of the Internet's oldest fandoms.

Special thanks to guest editor Mooncalf!

ATTENTION: This story is going through a rewrite. STAY TUNED.

Relinquishing the Elements was the toughest decision Twilight thought she'd ever have to make, but as a primordial evil emerges from the depths of oblivion, she finds herself faced with even more difficult choices.

If they are to overcome their strongest threat yet, they must find another way to stop it, but with their only lead still confined in a chest, no one knows what else to do.

But Discord does.

With the draconequus as their guide towards their only course of action, Princess Celestia and the Mane Six have no choice but to believe him. Will Twilight and her friends have what it takes to defeat this evil before Equestria decays into a world of shadow and darkness? And will Princess Celestia and Discord be able to overcome the past in order to prevent the end of Equestria as we know it?

Pre-read by Matt Wilson
Edited by BlackRoseRaven & OkemosBrony
Cover art by StePandy & FallenInTheDark

Shadows Over Equestria strays from the canon before "Twilight's Kingdom".

Three years. Three years since that one day that ruined her life.

Bitter, unemployed and penniless, Lightning Dust couldn't go one block without being whispered about until she reached Manehattan. Her last chance comes in the form of an advertisement looking for speedy delivery ponies.

But what will happen when her trial run involves facing her demons?

Just a little oneshot I suddenly got in the mood for doing. I can't believe I got it done in just a few days!

Hope you enjoy!