First of the Savage Skies series.
After running afoul of timberwolves in the Everfree Forest, Fluttershy is saved by a mysterious young colt with a most unusual and disturbing feature. Realizing that he is alone, without anyone else to care for him, Fluttershy realizes that she must try to bring this lonely foal out of the forest and give him a life of love and friendship. The problem is that this colt's...unique qualities have made him more than a few enemies, including some who are closer to home than Fluttershy realizes.

Now with a sequel: The Promise of a New Day.
Now with a TV Tropes page.

This story is a sequel to Seasons Turning

Story 6 in the Savage Skies series.

Thanks to Twilight Sparkle's plan, Dawn Lightwing's story has been spread across Equestria. Back in Ponyville, Dawn and those close to him prepare for the inevitable fallout. However, their plan has some unexpected consequences, leading to Dawn's place in Ponyville coming under threat in the most unexpected of ways as Fluttershy must prove her fitness to be Dawn's mother.

However, there is something more at work behind the scenes. In order to protect his home and his place in Ponyville, Dawn must venture abroad with an unexpected and unwanted ally in order to bring an end to these machinations.

The series begins in Foal of the Forest.
Now with a TV Tropes page.

This story is a sequel to Shadow of the Sun

Story 5 of the Savage Skies series:
Autumn has arrived in Ponyville. The harvest is in full swing and all is as it should be. After enduring the trials of the past few months, Dawn Lightwing is looking forward to what promises, hopefully, to be a peaceful season before a tumultuous winter. However, the coming season has the unwelcome effect of bringing his enemies closer than he feared. However, he is fortunate to have a loving family, good friends, and somepony who is maybe more than just a friend.
The series begins in Foal of the Forest.
Now with a TV Tropes page.

This story is a sequel to The Longest Night

As her twenty-first birthday dawns, Twilight Sparkle finds her simple life turned upside down. While her birthright forces itself into her life, Twilight also has to deal with the arrival of three Alicorns. No pony knows where they came from or what they want, and the Alicorns seem intent on keeping themselves and their purposes hidden. To uncover the truth, Twilight will set sail for distant, ancient lands with old and new friends.

Side-Stories: Velvet Sparkle and the Queen in Stone, Myths and Birthrights: Anthologiae, A Dream of Pride and Envy, The Castle Canterlot, by Honey Mead

TVTropes Page

Pre-readers/Editors: Honey Mead, WNA, Cerulean Voice
Cover art by Saint-Juniper

Comments Contain Spoilers

This is a story of Soarin Windsong and Braeburn Apple, as they discover what it means to love and be loved. However, everypony knows that life is not that easy.

Cover by ApertureIndigo.

Contains coltcuddling, M/M shipping and other things your friends would be ashamed to see.

But I know you like it.

On a dark night filled with even darker magics, an insane cult attempts to give Nightmare Moon a body and life of her own, utterly separate from Princess Luna. But, when the spell is interrupted by Celestia, something unexpected is created.

Now, a little black alicorn filly named Nyx finds herself living under the care of Twilight Sparkle, only to be haunted by memories and emotions from her past. Is she Nightmare Moon reborn or is she simply a doppelganger with a soul and mind of her own? Can Twilight Sparkle protect Nyx from those who refuse to see past her dragon eyes and black coat?

Or, will Nyx be forced to inherit the sins that may not even be hers and become the greatest evil Equestria has ever known?

Princess Twilight Sparkle is perfectly happy with her perfectly ordinary life in Ponyville. Every library book is properly shelved in its appropriate place, and her life continues on exactly according to her meticulously planned out schedule.

Then she gets a bodyguard.

Now she has to find some way to fit this new pony into her life on short notice. It won’t be an easy thing to adjust to—especially since Captain Storm Kicker’s presence makes it that much harder for her to go on living like the same old Twilight Sparkle she was before she became a princess.

Zevan was a loyal changeling and always did his queen's bidding, although he quietly questioned why changelings should end centuries of secret but peaceful intermingling with the pony population. After being expelled from Canterlot by the irresistible force of love and badly injured after crash-landing in trees, he had to reconsider his future. Ponies knew that changelings existed now, and the only example of them was Chrysalis' attempt to overthrow Celestia and their attack on Canterlot's population. His kind would be pariahs for the foreseeable future and maybe even their disguises would not keep them safe. A unicorn mare with a broken horn might do the trick though.

There is now a prequel to this story - Prelude To Change I suggest that you read that first.

Frothy Brew is the barista in the Canterlot café owned by himself, his wife, and his daughter. Years of hard work had made the café a successful and modestly popular place to stop and get a drink or a snack. Nothing prepared him though for it to become a hub of interaction with the undisguised changelings that were being seen more often in the streets of Canterlot. Can he put aside his feelings for the species though after witnessing the most horrifying aspect of the invasion years ago?

This story runs concurrently with the latter part of my Change of Life story. While reading that and Prelude To Change is not necessary, they do give valuable background that is glossed over in "Conversations". Cover art and story illustrations are all done by Foxenawolf.

Ponyville is seen as a quaint little town by those who live there, and for Twilight Sparkle, it has all she needs with her friends by her side. When a stranger that she is familiar with comes into town, she finds herself questioning as to what to do and how to accept a secret they have held from her since they meet.

Sometimes, friendship is tested by what your willing to see as truth or lies. But how can one trust those who live with using masks to hide both lies and truth?