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Edwin Shell is a human come to Equestria after his violent, early demise. He wakes up in a strange land in an even stranger body, finding colorful creatures that call themselves "ponies". He soon finds himself in a centuries standing power struggle between the Numbereds, the ancient race that has guarded Equestria since time immemorial, and the Angelics, who are countless and seek total annihilation of civilized life. Can Edwin find a way into this strange world, or will he be killed before he has a chance?

Chapters (66)
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When a young human super-soldier falls to Equestria, he must move on from his dark past filled with war, tragedy and bloodshed. Will he embrace this new chance at life, this new beginning? And most importantly. can he protect it when an ancient evil returns for a second time?

(NOT a Halo crossover.)

!!!Due to an incredibly busy schedule now that exams for college entry are closing in, New Beginnings is on Hiatus!!!

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What if, instead of going to Ponyville, Twilight Sparkle left Canterlot to go to the Pony Mesa Research Facility?
What if, instead of fighting off Nightmare Moon, she fought off a Resonance Cascade?
And what if, instead of meeting her friends in preparation for the Summer Sun Celebration, she instead met them in the aftermath of the Resonance Cascade?

This is the story of Twilight Sparkle, as she takes on the role of Gordon Freeman from the original Half-Life, and the friends she meets along the way.

Thanks to HiveLordLusa for the picture.

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Based on Sgt. Sprinkles' story "Cupcakes", Pinkie Pie has a dream that really disturbed her. She immediately checks up on her friend Rainbow Dash upon waking up. Despite Rainbow still being in one piece something is still terribly wrong...

Random tag added due to popular request. This is a serious story, but the journey through its chapters has proven....jarring for some readers.

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The Metro tunnels of Stalliongrad shelter the last remnants of ponykind from the ravages of the Apocalypse. Beneath the earth, ponies struggle to survive against mutants, radiation, and each other. But when an unstoppable threat emerges from the darkness of the Metro, one pony must brave the shadows to save not just his home, but the very existence of his people.

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Metal Gear has fallen into the hooves of an Equestrian revolutionary, who, with the backing of his human mercenary allies, intends to use it to depose Celestia and crown himself ruler. Having crossed into Equestria in pursuit of this rogue weapon, the legendary Solid Snake must ally with the residents of Ponyville to prevent a nuclear catastrophe.

See also Equestria Gear Solid, the hilarious spin-off EQG parody in which everything you know is wrong, and every single character from the story is an awful caricature of themselves.

Now with its own TVtropes page!

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After an ancient spell from Twilight goes awry, Fluttershy finds herself in a new world of powerful creatures. Whilst Fluttershy struggles in the new found world, Twilight is forced to leave Equestria to find the spell to bring her back. As Twilight and her friends journey through the outer lands of Equestria, Fluttershy attempts to uncover what shadows lurk just beyond Hoenn's sight.

Contains slightly dark images and scenarios. All events are based off of season one continuity, speculation and fantastical story elements. Any conflicting canon after season one is a result of the story being created before the premiere of season two.

Written to accommodate for people unfamiliar with both 'My Little Pony: Friendship is Magic' and 'Pokémon'.

Pre-read by Lam, Tom IWearHatsIndoors and lordelliot. Edited by Lam and lordelliot. Story consulting by Flak.

Equestria Daily: http://www.equestriadaily.com/2011/06/story-hoennshy.html

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The Ponyspawn have invaded Equestria, and it is up to the newest addition to the Grey Wardens, Twilight Sparkle, to find the means to drive them back! With her friends and allies at her side, can Twilight defeat the evil tide before all of Equestria is devoured?

The Sequel, Pony Age: Catalyst, is available.

Chapters (47)
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Luna discovers something hidden from Celestia for twenty years, now, with emotions running high, she enlists the help of the Mane 6... but what seemed to be a single mystery, soon reveals a darker and much more complicated plot that will soon decide the fate of Equestria.

Check out the Empty Room TV Tropes Page (Warning: Spoilers!)

Revised chapters edits and proofing (with many thanks) by: lammy, Trevor, Nick Nack, Fifth Alicorn

Chapters (29)
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Set in the far future after Celestia and Luna mysteriously vanished and the sun and moon froze in the sky, Antipodes is the story of two ponies thrust out into the harsh new world on an adventure to uncover what happened to the world so long ago.

(I wrote this when I was 17. it's pretty rough in places, but i think the basic ideas i had here were pretty cool. it's got a good skeleton)

Spanish translation here: https://www.deviantart.com/spaniard-kiwi/art/Antipodas-1-3-953524835

Chapters (33)