A blue box has fallen out of the sky, and crashed right into Twilight's Library! A strange brown stallion, calling himself the Doctor stumbles out. Soon after, strange stone Pegasus are everywhere, one of resident weather ponies has vanished, and Twilight is tossed in the middle! The Doctor and Twilight have to find out what's going on, before it's too late!

Following the events of "Traveler," Twilight goes to Canterlot to deliver her report on what has transpired since the Doctor's arrival in Ponyville directly to Princess Celestia. She leaves the Doctor in Spike's capable claws, asking him to show Equestria's newest arrival around town while the TARDIS rests and repairs itself from the trials of the previous day.

Although at first distraught at being stranded in the seemingly serene township of Ponyville, the Doctor finds himself reexamining his initial assumptions about the ponies, the land of Equestria, and his compulsive need to travel when he is confronted with the miraculous, impossible events surrounding Ponyville's resident party mare: Pinkie Pie.

The Pinkie Conundrum is the first in a series of continuity branching off from the foundations established by the Doctor Whooves stories: Number 12 and Traveler by the very talented Squeak-anon and all references to these two works of fanfiction is credited to him. Also, while this is a separate continuity from any future works by Squeak-anon, it is strongly recommended to read these two fictions before reading Pinkie Conundrum.

This work has been developed and published with permission and blessing of Squeak-anon, my original inspiration.
Doctor Whooves Intro posted on YouTube by: Cshep99
Cover art provided by FoxInShadow from deviantart.com
Proofreader, Editor and Number One Assistant: 2dextreem

If you enjoy this story as well as my other works, please leave a comment. Constructive critique is encouraged as well as any questions or remarks that may occur.

Truth is the first casualty of war.

The world is in flux; new ideals, groups and technologies permeate every level of society in this age of discovery. The field of augmentation has allowed ponies to improve themselves in ways that were unthinkable a generation ago. Yet, for every benefit, there is an inverse. A griffon civil war rages on the borders, feeding the profits of mercenary companies. Rising populations have forced the rich and poor ever further apart. Harmony is dying.

Mortally wounded after a fatal attack on her laboratory, an earth pony researcher is augmented against her will and sent out into a chaotic world in search of answers. But as her quest unravels this chain of events, she discovers an ancient conspiracy that will shake Equestria to its very core.

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TVTropes Page

When a freak reading accident causes Twilight to be admitted to the Ponyville hospital, Rainbow Dash is right by her side. Compelled by a sense of duty and repayment, she takes it upon herself to cheer up her friend.

Megan Richards is a normal, everyday wife and published author of 'My Little Horsey'... however the tales she writes about aren't fiction, but stories from her past. She thought she put the world of ponies behind her, but sometimes the past has a habit of catching up with you...

G1 meets G4 in a hopefully epic tale of the past, the present and the future.

I own nothing, also, minor cameos from other Hasbro properties such as Jem and the Holograms, Transformers G1 and GI Joe.

Cover image made by the very talented Egophiliac and from here.

fanfiction.net link!
Equestria Daily link... one of these days.
TV Tropes page
All the Tropes page

Sequel: The Conversion Bureau: United We Stand

Side-stories and mini-arcs not able to fit into the main narrative: Side Stories of First Contact

Recently rewritten. Contains occasional adult humor and violence.
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On a request from Princess Celestia, Twilight Sparkle and the rest of the mane six explore an abandoned mansion located deep in the woods. While doing so, they unwittingly stumble across an enchanted mirror that scrambles their DNA and pops out three brand new bouncing baby ponies. Hilarity and drama ensue as the mane six must cope with being suddenly thrust into motherhood, as well as protect their new foals from a dark god that wishes to use them for his own sinister gain.

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Fanart:
The three foals. by Freefraq on Deviantart.

Waking up in an alternate universe in which you are a supervillain can be hard.

Finding out your friends are rebels trying to kill or overthrow you isn't very easy to deal with either.

But trying to solve the situation? That's a real horn cracker.

Inspired by devastating personal losses, Apple Bloom dons a mantle from her youth to counter Equestria's rising crime after a dramatic change in government sends Canterlot into disarray. As more heroes follow her lead and arise in other cities, she must face her own past and dark new evils on the path back to harmony.

A diplomatic crisis arises between Equestria and the small, poor kingdom of Tarandroland, ancestral home of the reindeer. Celestia and Luna agree that it is time Luna takes a more active hand in foreign relations again, and Luna brings Twilight with her as someone she actually trusts and can talk to. But the mission turns out to be much more than political discussions - if scheming unicorn courtiers, unfriendly surly reindeer, bloodthirsty pirates, ancient sorcery and dangerous monsters weren't enough, our heroines must deal with something old - older than Luna. And is Luna really ready for diplomatic action, will Twilight learn to use a fan properly, and exactly how wrong are Spike's superhero comics about reindeer mythology?

Now has a TV tropes page

Celestia wakes up in human form and at an insane asylum where similarities between the world she is in now and the world of Equestria cause her to wonder if Equestria even exists or if she simply made it up to escape her human life. Does she try to hold on to her memories of her Canterlot life or does she let them go and accept them as nothing more than stories? Who is she going to trust? Who is she anyway?

This is only the beginning...

TV Tropes Page

Cover Art by blahblahaha123 (with some altering by me.)

Reading by Phantom Brony

Editors:

Csquared08, DarkPheonix, Gweat and Powaful Twixie, HenryAnthonyCourtler, Kaidan, KartalTheWriter,ZeroOmega