This story is a sequel to Steel Solstice

Continued in: My Little Apprentice: Apogee

Twilight Sparkle learns that the trust and goodwill of the Princess isn't always a good thing as she's given the trust of an important assignment. When that assignment turns out to be long-term, how will she handle taking care of a filly of her own? How will she handle this strange new filly, who proves to be much more than she appears. As a matter of fact, she seems to be from an entirely separate universe.

Meanwhile, Second Chance has kept only enough of her memories to know that she isn't what she should be. The wonderful world of Equestria has its own dangers, and she seems to have a knack for attracting trouble. The more of her memories return, the more she wishes she could just forget. But you can't forget when all of Equestria depends on you remembering.

Only one thing's for sure: The longer Twilight keeps this strange filly in her care, the stranger her own life will become, and things she thought she knew about Equestria will unravel before her eyes. Strange ancient devices, an eccentric mint unicorn and her so-called "Equestrian Precursor Society" are only the beginning for Twilight Sparkle as she begins a journey of her own. She too may wish she could simply forget. Unfortunately, it's too late for either of them.

This story is a sequel to Iron Hearts: Book 1 - Planetfall

An MLP/Warhammer 40K Crossover, part 2.

Celestia has handed down her order. The Iron Warriors must be defeated and driven from the planet, lest the corrosive grip of Chaos infect their world. With great reluctance, Twilight and Company depart for the Iron Warriors fortress-factory in order to confront the Chaos Warsmith. However, in this mission it is not the might of the enemy that will be their greatest challenge, but their own burgeoning friendships with the admittedly less-than-saintly members of the 38th Company.
At least until the Iron Warriors actually consider them a threat. Then it's totally their military might that will prove to be their greatest challenge.
All the while, the Tau forces lick their wounds and plot their next move. They are far from defeated, and the Iron Warriors have little inkling as to the aliens' true purpose.

MORE EXPLOSIONS!!

(Dark humor warning; minor grimdark)
(Cover art by Nicholas Kay)
(This series now has its own TVtropes page!)
(This series is a contestant in the Tournament of Canterlot, a charity event to raise money for Syrian refugees! Go here for details and donations!)

This story is a sequel to First

Three years.

It's been a long three years, up there in the north, fighting for Equestria.

At last, though, those three years are over, and Rainbow Dash is finally home again in Ponyville. The war is won and she's returned triumphant, having done her part and served with honor. But after what it's taken out of her - and left lingering inside of her - can Rainbow Dash really come home again so easily? Does the Ponyville she once knew still exist for her? And are the ponies she's coming home to getting back the same Rainbow Dash that went out there to fight for them, those three years ago?

Only marked for gore because of a moderate amount incidentally present by necessity in the first part, and it's not particularly bad, so don't let that turn you off if it's not your thing. Most of the story doesn't have any blood or violence at all.

An MLP/Warhammer 40K Crossover

The Iron Warriors 38th Company has landed in Equestria, entrenching themselves like a barbed hook. They hunt the aliens of the Tau Empire, intent on destruction and pillage.
A small squad is dispatched on a reconnaissance mission, only to find that there is intelligent life on this world besides the feuding space-farers.
Will these improbably adorable and friendly equine aliens turn the damned warriors of Chaos from their blood-soaked path, cleansing them of their dark legacy with the magic of friendship and harmony?

No.
No, that isn't happening.
EXPLOSIONS!!

(Dark humor warning; limited grimdark themes)
(Cover art by Nicholas Kay)
(This series now has its own TVtropes page!)
(This story is a contestant in the Tournament of Canterlot, a charity event to raise money for Syrian refugees! Go here for details and donations!)
(Featured on Equestria Daily 8/20/15 )

Princess Twilight Sparkle discovers a centuries-old mystery hidden in the Royal Archives. Her investigation leads through layer after layer of deception and misdirection, setting her hooves on a path that seems to be leading to a mysterious secret. Along the way, she learns that some friendships can be very, very strange.

Book 1 of the Alicorn Adventure series.

AUDIOBOOK by VisualPony
Featured at the Royal Canterlot Library
TV Tropes Page (Courtesy of Sandtalon)
Goodreads Page (Courtesy of Facedeer)
Equestria Daily Page

WARNING: Major spoilers in the comments. Takes place several months after the end of season four. (Not a Da Vinci Code crossover, BTW!)

Do you see a dark tag? No, you don't. Not dark. Well, okay, there are a couple of dark-ish bits, but that's all. Not enough to warrant a tag. Speaking of tags, there really ought to be "Badass Twilight" and "Friendshipping" ones.

Sequels and side-stories (and more) can be found here Offprint and AO3, and a hardbound two-volume set of all that can be ordered from The Ministry of Image.

My editor for the first edition of this story was Gogito, and I can't thank him enough for all the hard work he did. My editor for the revised version was PresentPerfect, and he did a terrific job of getting the story into excellent shape.

This story is a sequel to First

A call for help from an old friend takes Rainbow Dash to a place she'd rather have out of her life, but her business there isn't finished. In a town on the far northern border of Equestria, she'll have to discover how to resolve and close a painful chapter of her past for good by confronting once again what she left there five years ago during a brutal conflict that exacted a haunting toll on her... And an even bigger one on somepony that she loved.

This is the sequel to my previous story, First. The continuity isn't really too heavy, so you can probably get away with not reading "First" before reading this. A few references may make more sense if you do, but it won't break the story if you choose not to. Your call, really.

UPDATE: Another prequel to this, Born in Equestria, is now available, too.

Nopony ever said the friendship between Fluttershy and Discord would be an easy one. The difference in their life expectancies doesn’t help, but that’s a problem Discord can fix with a snap of the talons—that is, until Fluttershy finds out. Discord isn’t one to give up easily, though. He’ll do anything to keep his one and only friend. Anything.

Inspired by the image by C-Puff.

There is now a video review! And still another video review! And Russian and French translations! And there are dramatic readings from Joehighlord and Dr. Wolf! But wait! There's more: Dr. Wolf has collaborated with Meb90 and a team of other talented artists to produce something amazing.

Isolated from her friends and taken prisoner in the middle of a war, Twilight must deal with the very real dangers of being percieved as an enemy as well as the nightmares of her arrival on 'Earth'. Can she overcome her own fears and the fears of her captors? Will the wayward unicorn's assistance be a boon or a curse to the 'humans?' Most importantly, will she ever find her way home?

"In short, it's a story of friendship and plasma rifles, with the emphasis on the friendship. The characters are well written, the XCOM setting is fleshed out very well, and the story is compelling. If you love XCOM, you'll love the story, but even if you've never heard of it, it's more than worth giving the first 3 chapters a read.

There's excellent action later on, but the real strength lies in the collision between the friendly and naive world of Twilight Sparkle and the desperate world of humans fighting a losing war for survival and willing to do anything to turn the tide."

--Arzoo

(XCOM/FiM crossover)
(Cover art commissioned by a friend and created by the magnificent FoxInShadow!)
(Original cover art by the amazing Carnelian can be viewed here!)
(Gore tag for blood and some violence)
(Many thanks to the studius OminousTen, Arzoo, xXFluttershyForeverXx and finally Setokaiva for giving my rambles a once-over)
(Now with it's own TV Tropes page! Get to tropin' folks!)

For as long as any of the Cutie Mark Crusaders can remember, Diamond Tiara had always been the biggest bully they knew. But when that said bully dies in an accident, each of them starts to go through their own emotional experience from this sudden change in their lives. Each will learn more about themselves and about the pony who they all thought they knew before she is laid to rest.

***Takes place just after season 3 but before season 4. This story is completed.***

Now with TV Tropes page

Awake and alone, Applejack will find a way to survive.

And here's a TV Tropes page, if you're into that kind of thing.