Rainbow Dash and Fluttershy have always been best friends, doing everything together. After a sleepover with friends though, a simple dare leaves the two in a complicated situation with mixed feelings emerging and bizarre misunderstandings ensuing.

Co-written by Souldin and Rated Ponystar

Applejack couldn't be happier with her life. She owns a great farm and has been married for three years to the love of her life, Rainbow Dash. It's everything she's ever wanted in life, but now she wants something more. A family. A foal. Can she convince Rainbow Dash that they are ready to take a new step in their lives or will a haunting secret from Dash's past prevent them from having one?

(I know a story called "Foal" already exists, but I had this idea for months and I couldn't come up with a different title)

After finding her assistant missing again during her court duties, Twilight finds Spike with none other then Fluttershy and learns that the two have been a couple for a while. After overcoming her shock, she is told the story of how the two, unexpectedly, found comfort in each others embrace...

For as long as any of the Cutie Mark Crusaders can remember, Diamond Tiara had always been the biggest bully they knew. But when that said bully dies in an accident, each of them starts to go through their own emotional experience from this sudden change in their lives. Each will learn more about themselves and about the pony who they all thought they knew before she is laid to rest.

***Takes place just after season 3 but before season 4. This story is completed.***

Now with TV Tropes page

Seven months since she quit the academy, Lightning Dust has hit rock bottom. Her dreams are gone. Her heroes hate her. She's got no job and spends her days drinking. Yet sometimes, life always gives us another shot...

Applejack has always had a secret dream, one that some ponies would find strange for the tomboyish farmer. She's always wanted somepony to treat her to a special romantic night, while being treated like a real lady. Turns out all she had to do was have a certain rainbow-maned pegasus catch her in a dress. Such an awkward moment will lead them to a night neither will ever forget.

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All Princess Luna wanted was to wake up and enjoy her night, but after getting pranked one too many times by Philomena she is determined to get revenge. Can the palace withstand a prank war between these two?

Now on Equestria Daily

What if there was another side to Rarity's cutie mark story? One that featured a special pony who inspired her to become who she is today? This is the story of their bond, their love, their last days together.

Ponyville is getting ready to host a Dodgeball Tournament when Gilda shows up, challenging them against her own team. As they prepare themselves, Twilight and her friends learn a surprising secret about a certain crossed-eyed mailpony. Will Ponyville be able to beat Gilda and her team? Or will they taste rubbery defeat?

Based on the comic by matrix541: Upon being humilated in Ponyville, Trixie remembers how she once was the happiest unicorn in Equestria and how it all came apart...

(One of my earlier fanfics, now on Fimfiction)

Comic: http://matrix541.deviantart.com/art/Trixie-s-Story-258755970