Twilight Sparkle has been attending Canterlot Academy of Pokemon Studies since she was a child. Now in her late teens it is time for her to undergo a right of passage many ponies her age have already undergone: The Equestria Gym Circuit. Eight gyms, the Elite 4, and a Champion. Completing this challenge proves you know and love Pokemon and are capable of living in the world of Pokemon.

Of course, for Twilight, she never wanted to go on the journey to begin with... and nothing is ever easy.

Welcome to the world of Pokémon. Here, a young scientific teenage girl starts her journey as a Pokémon trainer, hoping to win championship leagues and catch as many Pokémon as possible, before she’ll learn that friendship is always a powerful tool to earn a Pokémon’s trust. And with a group of friends along with her little brother along with their Pokémon partners including Pikachu to accompany her, they are ready for the great beyond ahead as they make new friends, rivals and enemies on this brand new adventure.

A year has passed since the Pokemon League and things have been studious and yet quiet for Sarah Tomoe and her family. But that’s about to change when a message from Dialga, Palkia and Giratina and an alert from the Cutie Map brings them and the Mane Six (G5) together again for a mission to restore an Alternate Equestria which had been taken over by Grogar, a very powerful ram whose deception lead to the Princess Twilight blaming herself for all of the suffering and loss on her kingdom causing her to lose faith in the Magic of Friendship and Equestria suffering under the rams' tyrant rule. To set things right, the Mane Five and Sarah and her family will have to reignite the Princess and the Kingdoms faith and bring back the greatest Magic of all to defeat Grogar once and for all.

The world of Pokémon is in danger. Natural disasters are wreaking havoc, but that is only the beginning. If order is not restored, the world of Pokémon will be destroyed. A human named Spike is destined to stop the world of Pokémon's destruction, by being turned into a Pokémon. He has no memory of his life as a human, only the fact he was a human. Will he achieve his destiny and save this world?

Greetings, Bronies, Blazbluenians and Nintendudes! Three brothers, seperated to different worlds before hatching for protection. Portals opened, the brothers reunited, and have their very first adventure in one of their homeworlds, Equestria! New bonds are formed, and relationships are made. The Magic of Friendship is very powerful for the forces of good. Welcome to the beginning of Multiverse Hearts Series!
Disclaimer: I don't own MLP: FIM, Kung Fu Panda, Nintendo, or Blazblue. I was only inspired by them to make stories.

Characters:
Chameleo: A heroic Inteleon, a master of the Fox style and Chameleon style of Kung Fu, a jonin shinobi from the Pokemon Village hidden in the mist, right next to Viper’s home, the Valley of Peace, half of the reincarnation of the Element of Magic of the Elements of Harmony of his team, and a member of one of the hidden water village’s teams lead by Clawgashi, a Crawdaunt jonin
Viper: A snake who is a master of the Viper style of Kung Fu, a close friend of Chameleo, and the other half of the reincarnation of the Element of Magic of the Elements of Harmony of Chameleo’s team
Crane: A Crane, Master of the Crane style of Kung Fu, and Chameleo's Partner
Master Oogway: One of Chameleo's trainers
Raptor: A Blue Garchomp that can turn black, Chameleo’s younger brother, spent most of his life living in another world, ⅓ of the reincarnation of the Element of Loyalty of the Elements of Harmony of Chameleo’s team, and half of the reincarnation of the Element of Loyalty of the Elements of Harmony of Twilight’s team
Soulfire Nanaya: A Blue Lucario that can turn red, Chameleo and Raptor’s younger brother, martial artist, spent most of his life living in another world, and ⅓ of the reincarnation of the Element of Loyalty of the Elements of Harmony of Chameleo’s team
Owleta: A Decidueye who is a hidden mist village and hidden stone village shinobi and Chameleo's BBSFF (Best Big Sister Friend Forever)
Aggrock: A Aggron who is Tsuchikage of the Pokemon Village hidden in the Stones, Owleta's husband and Chameleo's big brother-in-law
Dragalchimaru: A Dragalge, old enemy of Chameleo and traitor of the Hidden Pokemon Mist Village
Skorchipo: A Centiskorch, follower of Dragalchimaru and ally of Chrysalis
Morrigan: A navy-blue Rito that can turn her feathers from navy-blue to black, the Champion of the Rito, a master of the bow and kunai knives, descendant of a great Rito champion known as Revali, having inherited Revali’s Gale, a special ability that creates an updraft, being an expert flyer, user of the Medoh Bow, a weapon that summons the Divine Beast Vah Medoh, and the reincarnation of the Element of Honesty of the Elements of Harmony of Chameleo’s team
Skylyzi: A green Rito, Morrigan’s younger brother, a master of the bow and swords, another descendant of Revali, and an master flyer
Datozo: A red Goron, master of clubs and greatswords, Champion of the Gorons, descendant of a tough and strong goron champion known as Daruk, wielder of the Rudania greatsword, a weapon that can used as a club and a sword, and summons the Divine Beast Vah Rudania, and reincarnation of the Element of Laughter of the Elements of Harmony of Chameleo’s team
Bladefin: A red Zora that can turn his scales from red to purple, the Champion of the Zora, a master of the duel-wielding spears and swords, a great healer, descendant of a great Zora champion known as Mipha, having inherited Mipha’s Grace, a special ability that heals others no matter how bad the wound, a close childhood friend of Morrigan, user of the Ruta Spear, a dual-wielded weapon that can be used as a single and two weapons, and summons the Divine Beast Vah Ruta, and the reincarnation of the Element of Generosity of the Elements of Harmony of Chameleo’s team
Mamota: A blue Zora, a master of the single-wielded spear and healing magic, younger sister of Bladefin, and another descendant of Mipha
Vaida: A Gerudo warrior, who wears yellow armor and a attire, chieftess of Gerudo Town, Champion of the Gerudo, master of the Scimitar and Shield, descendant of a powerful gerudo champion known as Urbosa, having inherited Urbosa’s Fury, a magical power that commands the lightning storms themselves at the snap of a finger, user of the Naboris Scimitar and Shield, a weapon and shield that together summons the Divine Beast, and reincarnation of the Element of Kindest of the Elements of Harmony of Chameleo’s team
Sonic the Hedgehog: A blue heroic hedgehog who is the fastest thing alive, and leader of Team Sonic, and the last ⅓ of the reincarnation of the Element of Loyalty of the Elements of Harmony of Chameleo’s team
Tails: A yellow two-tailed fox who can fly, best friend of Sonic, and member/engineer of Team Sonic
Knuckles: A red strong echidna, guardian of the Master Emerald, member of Team Sonic, and rival of Sonic
Amy: A pink hedgehog, a giant hammer as her weapon, leader of Team Rose, and Sonic’s “Girlfriend”
Cream & Cheese: A duo of a rabbit and a chao, and good friends and members of Team Rose
Big: A big purple cat who fishes with his amphibian friend, Froggy and member of Team Rose
Vector: A green crocodile detective with a likeness of money, leader of Team Chaotix, and temporary member of Team Rose
Twilight Sparkle: A unicorn who is Princess Celestia’s student, leader of the Mane 6 and reincarnation of the Element of Magic of her world
Spike: A dragon who is Twilight’s foster baby brother, and personal assistant
Shining Armor: Captain of the royal guard, Twilight's BBBFF (Best Big Brother Friend Forever), and Princess Cadence's husband
Rainbow Dash: A blue rainbow-colored-maned pegasus who is the foster twin sister of Raptor, and reincarnation of the Element of Loyalty of Twilight’s world
Scootaloo: A pegasus filly who is a member of the CMCs and Rainbow Dash's little sister-figure
Inferno Scarecrow: A unicorn colt who can turn into a dragon, is a member of the CMCs, Raptor's little brother-figure, close friend and brother of Scootaloo, who has a secret in his magic and scales that nopony knows, not even him.
Pinkie Pie: A energetic and joyful earth pony who is a super-duper party planner of Ponyville, and reincarnation of the Element of Laughter of Twilight’s world
Rarity: A fashionista unicorn who is fantastic at making and sewing dresses and costumes, and reincarnation of the Element of Generosity of Twilight’s world
Sweetie Belle: A unicorn filly who is Rarity's little sister, and member of the CMCs
Water Wing: A pegasus colt who is a member of the CMCs, close friend and brother of Sweetie Belle and has a secret in his necklace that nopony or himself knows about.
Applejack: A strong and truthful earth pony who is a member of the Apple family at Sweet Apple Acres, and reincarnation of the Element of Honesty of Twilight’s world
Apple Bloom: A earth pony filly who is Applejack's younger sister and member of the CMCs
Apple Wasp: A earth pony colt who is Apple Bloom's brother as well as a close friend, and has a secret that no one, even he knows.
Fluttershy: A timid and caring pegasus who lives in her cottage with her animal friends, and is the reincarnation of the Element of Kindness of Twilight’s world
Princess Celestia: Ruler of Equestria and raiser of the sun
Princess Luna: Co-ruler of Equestria, Celestia's younger sister and raiser of the moon
Princess Cadance (Mi Amore Cadenza): Shining Armor's wife, Twilight's big sister-in-law, and Princess Celestia's niece
Discord: Spirit of Chaos and Disharmony
Nightmare Moon: Darkness incarnation of Princess Luna
Chrysalis: Queen of the changlings and enemy of the Elements of Harmony
Makoto Nanaya: A Squirrel Beastkin, Soulfire’s twin foster-sister from another world, and martial artist
Ragna the Bloodedge: A misunderstood wanted criminal known as "The Grim Reaper" who fights for what's right
Noel Vermillion: One of Makoto's best friends
Master Jubei: A strange cat who is trainer of Ragna and an old friend of Princess Celestia
Spyro: A rare purple dragon breed who is heroic and likes to kick bad guy butt
Sparx: Spyro's dragonfly twin brother
Cynder: A bad-turned-good dragon who has a close relationship with Spyro
Whirlwind: A dragon-unicorn hybrid with rainbow powers, and Scootaloo's and Inferno's other big sister-figure
Zap: A water dragon who has electric powers and was raised by electric eels
Gill Grunt: A gillman who is one of Spyro's best friends
Camo: A plant-dragon hybrid born at the Tree of Life and can make the fruit he grows explode
Stealth Elf: A forest elf who's a ninja and another one of Spyro's best friends
Sunburn: A dragon-phoenix hybrid who can teleport
Eruptor: A volcano creature who is also one of Spyro's best friends
Bash: A earth dragon who really knows how to roll with it
Drobot: A dragon with a mechanical suit
Trigger Happy: A gremlin with a crazy attitude and gold-coin pistols who is also one Spyro's best friends

Everyone likes to have fun, but sometimes, fun things hide the most frightening sights. Because on the Elements of Harmony's next adventure, they, Big Mac and the CMCs will be in for the scariest night in another world in lives. There will be scares, frights, and hiding from hunters, both flesh and metal. For they will learn that the faces of friendliness and fun can be the most dangerous mask. Find out on the next Multiverse.
Disclaimer: I don't own MLP: FIM, Nintendo, Kung Fu Panda, Blazblue or FNAF. I was only inspired by them to make stories.

Characters:
Chameleo: A heroic Inteleon, a master of the Fox style and Chameleon style of Kung Fu, a jonin shinobi from the Pokemon Village hidden in the mist, right next to Viper’s home, the Valley of Peace, half of the reincarnation of the Element of Magic of the Elements of Harmony of his team, and a member of one of the hidden water village’s teams lead by Clawgashi, a Crawdaunt jonin
Viper: A snake who is a master of the Viper style of Kung Fu, a close friend of Chameleo, and the other half of the reincarnation of the Element of Magic of the Elements of Harmony of Chameleo’s team
Crane: A Crane, Master of the Crane style of Kung Fu, and Chameleo's Partner
Raptor: A Blue Garchomp that can turn black, Chameleo’s younger brother, spent most of his life living in another world, ⅓ of the reincarnation of the Element of Loyalty of the Elements of Harmony of Chameleo’s team, and half of the reincarnation of the Element of Loyalty of the Elements of Harmony of Twilight’s team
Soulfire Nanaya: A Blue Lucario that can turn red, Chameleo and Raptor’s younger brother, martial artist, spent most of his life living in another world, and ⅓ of the reincarnation of the Element of Loyalty of the Elements of Harmony of Chameleo’s team
Morrigan: A navy-blue Rito that can turn her feathers from navy-blue to black, the Champion of the Rito, a master of the bow and kunai knives, descendant of a great Rito champion known as Revali, having inherited Revali’s Gale, a special ability that creates an updraft, being an expert flyer, user of the Medoh Bow, a weapon that summons the Divine Beast Vah Medoh, and the reincarnation of the Element of Honesty of the Elements of Harmony of Chameleo’s team
Datozo: A red Goron, master of clubs and greatswords, Champion of the Gorons, descendant of a tough and strong goron champion known as Daruk, wielder of the Rudania greatsword, a weapon that can used as a club and a sword, and summons the Divine Beast Vah Rudania, and reincarnation of the Element of Laughter of the Elements of Harmony of Chameleo’s team
Bladefin: A red Zora that can turn his scales from red to purple, the Champion of the Zora, a master of the duel-wielding spears and swords, a great healer, descendant of a great Zora champion known as Mipha, having inherited Mipha’s Grace, a special ability that heals others no matter how bad the wound, a close childhood friend of Morrigan, user of the Ruta Spear, a dual-wielded weapon that can be used as a single and two weapons, and summons the Divine Beast Vah Ruta, and the reincarnation of the Element of Generosity of the Elements of Harmony of Chameleo’s team
Vaida: A Gerudo warrior, who wears yellow armor and a attire, chieftess of Gerudo Town, Champion of the Gerudo, master of the Scimitar and Shield, descendant of a powerful gerudo champion known as Urbosa, having inherited Urbosa’s Fury, a magical power that commands the lightning storms themselves at the snap of a finger, user of the Naboris Scimitar and Shield, a weapon and shield that together summons the Divine Beast, and reincarnation of the Element of Kindest of the Elements of Harmony of Chameleo’s team
Sonic the Hedgehog: A blue heroic hedgehog who is the fastest thing alive, and leader of Team Sonic, and the last ⅓ of the reincarnation of the Element of Loyalty of the Elements of Harmony of Chameleo’s team
Tails: A yellow two-tailed fox who can fly, best friend of Sonic, and member/engineer of Team Sonic
Knuckles: A red strong echidna, guardian of the Master Emerald, member of Team Sonic, and rival of Sonic
Amy: A pink hedgehog, a giant hammer as her weapon, leader of Team Rose, and Sonic’s “Girlfriend”
Vector: A green crocodile detective with a likeness of money, leader of Team Chaotix, and temporary member of Team Rose
Twilight Sparkle: A unicorn who is Princess Celestia’s student, leader of the Mane 6 and reincarnation of the Element of Magic of her world
Spike: A dragon who is Twilight’s foster baby brother, and personal assistant
Rainbow Dash: A blue rainbow-colored-maned pegasus who is the foster twin sister of Raptor, and reincarnation of the Element of Loyalty of Twilight’s world
Scootaloo: A pegasus filly who is a member of the CMCs and Rainbow Dash's little sister-figure
Inferno: A unicorn colt who can turn into a dragon, is a member of the CMCs, Raptor's little brother-figure, close friend and brother of Scootaloo, who has a secret in his magic and scales that nopony knows, not even him.
Pinkie Pie: A energetic and joyful earth pony who is a super-duper party planner of Ponyville, and reincarnation of the Element of Laughter of Twilight’s world
Rarity: A fashionista unicorn who is fantastic at making and sewing dresses and costumes, and reincarnation of the Element of Generosity of Twilight’s world
Sweetie Belle: A unicorn filly who is Rarity's little sister, and member of the CMCs
Water Wing: A pegasus colt who is a member of the CMCs, close friend and brother of Sweetie Belle and has a secret in his necklace that nopony or himself knows about.
Applejack: A strong and truthful earth pony who is a member of the Apple family at Sweet Apple Acres, and reincarnation of the Element of Honesty of Twilight’s world
Apple Bloom: A earth pony filly who is Applejack's younger sister and member of the CMCs
Big Macintosh: A earth pony stallion who is Applejack's older brother
Apple Wasp: A earth pony colt who is Apple Bloom's brother as well as a close friend, and has a secret that no one, even he knows.
Fluttershy: A timid and caring pegasus who lives in her cottage with her animal friends, and is the reincarnation of the Element of Kindness of Twilight’s world
Princess Luna: Co-ruler of Equestria, Celestia's younger sister and raiser of the moon
Makoto Nanaya: A Squirrel Beastkin, Soulfire’s twin foster-sister from another world, and martial artist

Guest Characters:
Gregory: A young boy who is lost in Freddy Fazbear's Mega Pizzaplex, and is trying to survive the night.
*Glamrock* Freddy Fazbear: A bear animatronic who is the lead singer of the Glamrock band, and the protector of Gregory.
Melody: A young girl, also lost in Freddy Fazbear's Mega Pizzaplex, trying to survive the night as well.
Vanessa: A security officer who keeps an eye on the pizzaplex, animatonics and keeps an eye out for intruders and lost people.
Roxanne Wolf: A wolf animatronic who is plays the keytar in the Glamrock band, and is self-centered on her fame and beauty.
Montgomery Gator: A alligator animatronic who is the bass guitarist of the Glamrock band, and is known to be be strong and tear down obstacles such as fences.
*Glamrock* Chica: A chicken animatronic who is the electric guitarist of the Glamrock band, and has pizza as her favorite food.
Vanny: A crazy killer in a bunny costume that has red eyes.
Daycare Attendent: A celestial animatronic that has a two-face split personality

• Sun: The fun, happy and playful side of the daycare attendant when lights are on.
• Moon: The dark, sick, and deadly side of the daycare attendant when lights are off.

Burntrap/William Afton: A withered Spring Bonnie animatronic infused with the corpse of William Afton.
Blob: A molten animatronic made of tentacle-like wires.

Each story has multiple ways of being told, as a wise man once said.

With that in mind, this is the story of a region that very few people even know exist. It's history is as rich and interesting as the many new Pokémon you get to see and be enticed to try and catch.

The Eqtrot region is like a modernized kingdom. There's adventure waiting around every corner, many new yet oddly familiar faces for you to meet. Many mysteries about this region's past, and a team of historical lunatics trying to awaken an ancient evil, in hopes of dethroning the princesses and conquering the world.

It's uncertain of how this story will end, but most are always concerned on how it begins.

And this story... it begins like all great stories of its kind do, with a fresh start.

This is the story of a new trainer, who's in for the wildest journey of his life.

Follow the adventure of the Rookies, young trainers who enrolled at the Pokémon school of the elementary kindness holder. During their course to achieve their goal, they will face several opponents, encounter unknown Pokémon and make new friends.

Hey paisanos! Hope you're ready, 'cause after Twilight and Spike returned to Equestria as well as Chameleo and his friends returning to their world, the Mane 6 and their friends found a strange well. But by going into that well, they discovered that it was a doorway to another world, landing in the Mushroom Kingdom. They get to meet all kinds of new friends and enemies. What will happen in their adventure? Find out on Multiverse Hearts: Super Mario Bros. Super Show!
Disclaimer: I don't own MLP: FIM, Nintendo, or Blazblue. I was only inspired by them to make stories.
Characters:

• Twilight Sparkle: A alicorn who is Princess Celestia’s student and Equestria’s newest princess, leader of the Mane 6 and reincarnation of the Element of Magic of her world
• Rainbow Dash: A blue rainbow-colored-maned pegasus who is the foster twin sister of Raptor, and half of the reincarnation of the Element of Loyalty of Twilight’s world
• Raptor: A Blue Garchomp that can turn black, Chameleo’s younger brother, spent most of his life living in another world, ⅓ of the reincarnation of the Element of Loyalty of the Elements of Harmony of Chameleo’s team, and half of the reincarnation of the Element of Loyalty of the Elements of Harmony of Twilight’s team
• Scootaloo: A pegasus filly who is a member of the CMCs and Rainbow Dash's little sister-figure
• Inferno: A unicorn colt who can turn into a dragon, is a member of the CMCs, Raptor's little brother-figure, close friend and brother of Scootaloo, who has a secret in his magic and scales that nopony knows, not even him.
• Pinkie Pie: A energetic and joyful earth pony who is a super-duper party planner of Ponyville, and reincarnation of the Element of Laughter of Twilight’s world
• Rarity: A fashionista unicorn who is fantastic at making and sewing dresses and costumes, and reincarnation of the Element of Generosity of Twilight’s world
• Sweetie Belle: A unicorn filly who is Rarity's little sister, and member of the CMCs
• Water Wing: A pegasus colt who is a member of the CMCs, close friend and brother of Sweetie Belle and has a secret in his necklace that nopony or himself knows about.
• Applejack: A strong and truthful earth pony who is a member of the Apple family at Sweet Apple Acres, and reincarnation of the Element of Honesty of Twilight’s world
• Apple Bloom: A earth pony filly who is Applejack's younger sister and member of the CMCs
• Apple Wasp: A earth pony colt who is Apple Bloom's brother as well as a close friend, and has a secret that no one, even he knows.
• Fluttershy: A timid and caring pegasus who lives in her cottage with her animal friends, and is the reincarnation of the Element of Kindness of Twilight’s world
• Makoto Nanaya: A Squirrel Beastkin, Soulfire’s twin foster-sister from another world, and martial artist
• Soulfire Nanaya: A Blue Lucario that can turn red, Chameleo and Raptor’s younger brother, martial artist, spent most of his life living in another world, and ⅓ of the reincarnation of the Element of Loyalty of the Elements of Harmony of Chameleo’s team
• Mario: A plumber from Brooklyn, clad in red with an M on his cap, who is the hero of the Mushroom Kingdom
• Luigi: Mario's little brother, despite being taller than him, clad in green with an L on his cap, being more jumpy and easily frightened.
• Princess Peach: The fair and beautiful princess of the Mushroom Kingdom, clad in pink, who loves her friends and family more that anything
• Toad: A resident of the Mushroom Kingdom

Villains:

• Bowser: The king of Koopas, and arch-enemy of Mario
• Mouser: A humanoid rat and one of Bowser's henchmen
• Tryclyde: A three-headed snake and one of Bowser's henchmen
• Koopa Troopa: A humanoid turtle and one of Bowser's henchmen

Off and on with dealing with portals of other worlds with scary and friendly entities for the past few years a special group of creatures pops up that every pony hopes aren't are new allies in friendship this time.

A series of one-shots of ponies meeting the beings known as pokemon ensues. Mostly fluff pieces that came to my mind though you can request what ponies meet what pokemon and how if you want.