The "what-if" sequel has arrived -- Equinophobia: Silvery Lies.

"Equinophobia is a psychological fear of horses"
Sometimes you're lucky, and sometimes you're unlucky. Ryan finds herself the latter as she ends up in a world of sunshine, rainbows, and pure horror.

A story of an out-of-place person learning to adapt to their new environment.

Alternate Universe tag for lack of or changes in Equestria Girls elements and the Crystal Empire's history.

Written as the A-side to A Chromatic Scale. The stories are not related otherwise and can be read separately.

After discovering Sunny Town and its dark secret, Apple Bloom flees with zombies in hot pursuit. One of the Sunny Towners try to protect her and allow her escape. Apparently, it isn't enough. Twilight comes to the rescue, only to see poor Apple Bloom face a horrible death at the hooves of her attackers. Apple Bloom becomes one of them, and is now forced to live as one of the Blanks. She didn't want this. How will she deal with the new life, and how will Ponyville take the devastating news, especially the victim's own sister?

This story is based off Donitz's Story of the Blanks. It takes place in the middle of Season 2.

Note: The [Gore] tag only applies to Chapter 1, and even then, it's only light gore. Nothing like Cupcakes or anything like that. It's a T-rated fic anyway.

The Pinkie Pie clones are gone. They have all been zapped back to the Mirror Pond. All, except one.

This particular clone knew that if she stayed around Ponyville, she would be spotted, and end up just like all the other clones. And she didn't want that. So what else is there to do? Escape Ponyville, and to where? Manehatten. Meanwhile, a certain blue unicorn mare is busy trying to make herself look better while ultimately failing. Surprises will await them both.

Please do check out the Reading List by Lance Omikron to navigate the Amalgam Universe most clearly

A massive war of titanic forces is taking place in the Kaiju's world. However, when two faction's leaders, the current Godzilla and his 'brother' Xenilla duke it out; humanity unleashes its most devastating weapon. Something beyond comprehension occurred and the boundary that divides worlds, if only for the briefest of moments, was torn to shreds. New forms are taken, new bodies assumed. But old hatreds die hard. But how well can hatreds continue in the world of love and tolerance? Especially with its own demons follow it there?

Godzilla Franchise by Toho Company Ltd.
My Little Pony is owned by Hasbro Studios.
This is a non profit fan-work and I claim no ownership on the IP itself.
Story created by Tarbtano
Co-created and Contributed by Faith-Wolff and Skylark8756

HOLY SHEETZU WE GOT FEATURED! THANKS GUYS!
6/27/2014
Now on TV tropes (Thanks Raidrik, VampyGirl; Lance Omikron, Ultimomant, and ZimFan!)

Kaiju Cast:

Godzilla a.k.a Gojira
Xenilla
Mothra
Anguirus
Rodan
Destroyah

[Character copyright of Toho and Daiei Company, artwork property of Matt Frank]

(for any G-fans, Xenilla is the kaiju you may know as Spacegodzilla. I changed the name because I got quirked about typing it repeatedly and am writing the story so it can at least be understood by just an MLP or just a G-fan; and thought it get very confusing that one character's name was just another character's name with an adjective. Also... don't pretend it's the most imaginative name Toho has every made)

Kuno, a young changeling, is left weak, bloodied, and bruised after the events of the Canterlot wedding. She is soon discovered by Warden, a Royal Guard. But for some reason, Warden shows her mercy. Instead of taking her into the custody of the Royal Guard, he becomes both her captor and her savior. But over time, Kuno will come to ask herself the hardest question she has ever pondered: Can a changeling feel love?

A normal day was all it took.
A simple failed prototype, a missed experiment.
There was an explosion, and I woke up. I don't really know what happened between those two events, but I'm fairly certain I shouldn't have awoken in a small, dark box.

I'm scared.

Cover art by the amazing Avatar of Madness!

Twilight Sparkle didn't show up without clothes in the human world, and neither did Sunset Shimmer. Where exactly are there clothes coming from?
~
Credit to Kishmond for cover art.

An English knight married a kindly woman, touched in the head, who thought she was an alicorn. She was right.

Then one day Cecilia disappeared.

He knew that Cecilia vanished into the side of the statue, the same place she lamented the 'mirror closing' two and a half years ago. He threw a rock at it... and it vanished. It was true. He had to find her.

He didn't care about Cecilia's madness, about this 'Equestria' or her obsession with ponies. He loved her. He loved her enough to walk into Hell itself. He would bring her back, no matter what.

TV Tropes page

Non-canon chapters 8-12

Edited by: John Hood, OkemosBrony, Legion222 & Katherine Kerensky (Chapters 1-12)
Guest Editor: refferree

Twilight is surronded by ponies that look like her friends and act like her friends, but aren't her friends.

Cover art by Pyro-Paws:
http://pyro-paws.deviantart.com/art/MLP-I-m-Not-Crazy-384122490

The history of Equestria spans dozens of centuries, and many terrible foes have risen up from the past to threaten the future once more, only to be defeated.

When a vicious and powerful enemy older than any Twilight, her friends, or even the Princesses have faced before returns, they will have to reach out to an ally just as ancient for help... but is she still the heroine she once was?

This story takes place after the end of Season 3.

Honourable Mention: Best Fimfiction, Pony Awards 2013

Full-Cast, Illustrated Audio Drama version by Scribbler Productions can be found here!

Hardcopy editions from Ponyfeather Publishing can be found here!