Please do check out the Reading List by Lance Omikron to navigate the Amalgam Universe most clearly

A massive war of titanic forces is taking place in the Kaiju's world. However, when two faction's leaders, the current Godzilla and his 'brother' Xenilla duke it out; humanity unleashes its most devastating weapon. Something beyond comprehension occurred and the boundary that divides worlds, if only for the briefest of moments, was torn to shreds. New forms are taken, new bodies assumed. But old hatreds die hard. But how well can hatreds continue in the world of love and tolerance? Especially with its own demons follow it there?

Godzilla Franchise by Toho Company Ltd.
My Little Pony is owned by Hasbro Studios.
This is a non profit fan-work and I claim no ownership on the IP itself.
Story created by Tarbtano
Co-created and Contributed by Faith-Wolff and Skylark8756

HOLY SHEETZU WE GOT FEATURED! THANKS GUYS!
6/27/2014
Now on TV tropes (Thanks Raidrik, VampyGirl; Lance Omikron, Ultimomant, and ZimFan!)

Kaiju Cast:

Godzilla a.k.a Gojira
Xenilla
Mothra
Anguirus
Rodan
Destroyah

[Character copyright of Toho and Daiei Company, artwork property of Matt Frank]

(for any G-fans, Xenilla is the kaiju you may know as Spacegodzilla. I changed the name because I got quirked about typing it repeatedly and am writing the story so it can at least be understood by just an MLP or just a G-fan; and thought it get very confusing that one character's name was just another character's name with an adjective. Also... don't pretend it's the most imaginative name Toho has every made)

This story is a sequel to The Dresden Fillies: False Masks

It's been a while since the girls have seen their good friend Harry Dresden. Discord escaped, Luna attended her first Nightmare Night, the Royal Wedding was crashed by hordes of changelings, and Pinkie Pie threw a statistically improbable number of parties. They tried inviting Dresden, but between his new job and new apprentice, he always claimed to be too busy. The solution was obvious; if he couldn't come to his friends, they needed to go visit him. Besides, they say Earth is lovely this time of year. What could go wrong?

'To whoever gets this message, we're in desperate need of help.'

'Equestria...Equestria is on the brink of being destroyed. Sombra, Tirek and many other villains are taking over our world. The Ambassadors of Harmony are nowhere to be found and Celestia and Luna...Faust, Celestia and Luna. I don't know who you are and I don't care, just as long as you can save us. And if you can't do that, then at the very least...'

'Avenge us.'