This story is a sequel to Rainbow Factory

Cloudsdale Weather Corporation has been running without incident for over twenty years. That is, until two foals manage to avoid being processed and find themselves in the haunted bowels of the massive facility. Can they make it out of the abandoned factory with their sanity intact? Will they uncover the secrets even a company as dark as the CWC is ashamed to keep? And what of the workers who help ensure that, in the end, not a single soul gets through...

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—[TVTropes Article]—[Plagen Shiki's Reading]—[The Song Inspired by the Story]—

On a dark night filled with even darker magics, an insane cult attempts to give Nightmare Moon a body and life of her own, utterly separate from Princess Luna. But, when the spell is interrupted by Celestia, something unexpected is created.

Now, a little black alicorn filly named Nyx finds herself living under the care of Twilight Sparkle, only to be haunted by memories and emotions from her past. Is she Nightmare Moon reborn or is she simply a doppelganger with a soul and mind of her own? Can Twilight Sparkle protect Nyx from those who refuse to see past her dragon eyes and black coat?

Or, will Nyx be forced to inherit the sins that may not even be hers and become the greatest evil Equestria has ever known?

When your life is as dull a gray as the world that surrounds you, the mundanities can make it all seem meaningless. Sometimes all we need is a little color -- or six -- to reintroduce us to what truly makes life worth living.

*6-16-2017 Edit, added Rainbow Dash tag because it triggered knighty.*

There was only one explanation. For all of it. All of the strange, erratic behavior. Her irrational fear of the sun. Her nocturnal habits of locking herself in in the dark and closing all the blinds. Wearing her sunglasses everywhere, even inside! It was time to invest in some silver, garlic, and a wooden stake.