Accompanying Chrysalis on her mission to end the war between the rest of the world and the Hive, the Elements of Harmony are forced to face the corrupted hive Council inside a chaotic world they know nothing about.
Doctor Whooves travels back in time with Alex, Derpy, And Rainbow Dash, to find out how the Elements of Chaos survived the defeat of Night Mare moon, and eventually made a comeback in the future.
After a disastrous falling out with the mare he cares about, Alex returns home to earth to clear his mind. But, you can only hide from the insanity of Equestria for so long before it comes looking for you.
Rainbow Dash, now a Captain of the Royal Guard, has finally gotten her hooves on the spell to save somepony very dear to her. But, a lot can change in the time that passed, and she can only hope he'll understand.
Twilight and her friends are invited to spend a week at a new resort, 'Haven Station.' However, the unknown ponies that invited them, have a much more nefarious intention for the group of friends. Will they be able to escape?