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T
Source

When Ruby boards the first trans-oceanic flight in Equestrian history, the last place she expects to end up is stranded in the middle of Eternity's Crossing in the wake of a horrific zeppelin crash. After a mysterious tower leads her and a fellow survivor to discover a twisted and fragmented city twenty thousand feet below the surface of the ocean, though, a bit of fire and smoke is the last thing she needs to worry about. Between the horrendously disfigured residents and the paranoia of the madmare who once built and controlled it, daily survival in this corrupted utopia is anything but a guarantee. But with the help of some new friends and a few genetic enhancements, Ruby isn't going down without a fight, and in the process might just discover that the deadliest weapon in Harmony is herself.

An adaptation of BioShock for the world of MLP. Written to be comprehensible to anyone, regardless of whether they've played the original game.

Chapters (12)
E
Source

Immediately following the events of Appletheosis, Applejack must relearn her place in the world as the new Princess Mara of Equestria. Meanwhile, her family and friends have their own troubles with the changes. Through it all, little Merry May, first in the service of her goddess, tries to hold things together and keep everypony sane and happy.

I won't tell you what to do, (this time) but reading Appletheosis first is highly recommended. The Shadow of the Goddess also provides useful background and will become very relevant in later chapters.

Chapters (7)
T
Source

For most of Applejack's life, she didn't know what she was. True, she understood who she was well enough.
But ponies don't change shapes, nor do they get strength from love.
Applejack never thought too hard on it... until the events of a certain wedding brought about some harsh realizations.
Now, with Equestria still reeling from the surprise attack, will Applejack manage to come to terms with what she is? Will she even be able to keep her secret safe?
For if the royal guards don't get her first, the conspirators in the shadows just might...


Image provided by Heilos -

Chapters (19)
T
Source

A refined mare fresh out of high school and a dropout following her dreams find themselves forced to spend a lot of time together.

With the help of a meddling psychology tutor and their new classmates, can they find what they've been looking for?

French Translation!

Fan Stuff!

Chapters (22)