The year is 2014, Equestria teeters on the brink of war. As the Zebra Republic seeks to conquer the lands of the old Zebra Empire, Equestria has created a task force to be the first line of defense, the tip of the spear, and equipped with the latest battlefield technology and trained in advanced covert tactics. They call themselves, the Ghosts.

Crossover between the first Ghost Recon game, and the events take place after the 4th season