Twilight can not find her pillow.

After being abandoned by her mother in the Everfree forest, Derpy is taken in by the kind earth pony Mary Doo, who tries to do all in her power to unlock Derpy's inner genius from her seemly broken body and mind. As Derpy learns to communicate she also learns the secrets of the world, makes friends, falls in loves, all on her quest to learn to fly so that she may finally accomplish her life long dream and face her face dark past.

This is a spin-off of Bubbles: http://www.equestriadaily.com/2011/03/story-bubbles.html

In the aftermath of Discord, Equestria becomes accessible to the universe as a whole. When the USS Enterprise stumbles upon them, will they accidentally shatter the peace this world has known?

Most ponies, when they see a pony with an hourglass cutie mark, would figure that it would mean their talent has something to do with time, or clocks, or another harmless meaning. Technically, the first is true, but there is a hidden meaning beneath it. To those that carry it, they know that the hourglass marks them as refugees, survivors from a war that would make any normal pony go mad from glimpsing just a fraction of the sheer scope of it. These unusual ponies have all found asylum in Equestria, but now, one last escapee will be followed by an evil that will threaten to ignite the conflict anew and bring down their last refuge with it.

But this newcomer not only brings the remains of the conflict with him, but is their best and only hope of ending it once and for all.

The last gasp of the Time War has come to Equestria. The Doctor will find old friends, make new ones...and face off with one of his greatest foes, one last time.

The Starship Enterprise and her crew must deal with a scientist haunted by his past, armed with a tool that could either revive his lost world in a new form or bring untold destruction. Meanwhile, the last two members of a dying race have made their way into the Enterprise's holodeck and have started up a simulated world to live in, populated by colorful talking ponies that seem to transcend the limitations of normal holodeck characters.

From another perspective, Twilight Sparkle and her friends must deal with strangers from another world who make claims that shake the very foundations of Equestrian history, science and philosophy. Can even the Magic of Friendship stand up to the possibility that the world is a simulation? Or do the ponies have what it take to prove to the strangers the truth of their existence?

Daily work for this astronaut, until everything goes wrong. How would a scientist react when facing things science can't explain, when dropped in a world technologically behind of a few centuries. Or is he simply going insane?

In Equestria's far future, one thousand and five years after the return, a dysfunctional group of argumentative ponies must quest to defeat the most dangerous enemy of Equestria to ever live; the malevolent Lord Second, one of the only known members of the race of elder gods known as the humans, and the ancient cult who worships him, the Brotherhood of Man.

An over-the-top surrealist comedy, with slight serious elements. Expect a steady decline into insanity.

Cancelled, due to reasons of severe cranial trauma

Now with audio reading and prequel story, Shades of Grey, by Draven Eclipse.

The Lone Wanderer has been known as the man who shouldered the nightmares of every man, woman and child in the wasteland, so that they may live. But when the Wanderer was once again abducted by aliens, he found himself falling, quite literally, into a whole new wonderous world, untouched by the horrors of nuclear devastation.

He has been facing other people's nightmares constantly for almost a decade, it was high time he was allowed to wake up.

Meanwhile, the ponies of Equestria are baffled by a strange object that fell from the sky.

Fallout/FIM crossover. HiE. T for violence and some language.

Now with a TVTropes page!

There is a world where Life and Death govern all imaginable realms. A world where Watchers guard over their planets and the creatures that roam them. In this world, a young soul goes on a journey to a place he never thought existed, after cutting an untold deal with Death.

Equestria, a place of magical creatures and mysteries, offers him a new chance at life. A chance he will have to pay dearly for. This is the written story of his adventures, some of the sorrows and victories of his life as he goes through great challenges and fights his inner darkness.

At the end of this journey, one begs the question: What is better? To be born good, or to overcome your evil side through great effort and sacrifice?

Tagged with Human for the prologue.

Follows show's cannon up until end of Season 2.

Now a published book!
And it's own TvTopes page!

Spanish translation: Here

First chapter published January 2012
Marked as Complete on 31st August 2014
Published (printed) on 25th November 2014

PM me for the full digital version of the now-printed book! (includes text PDF, full cover and fan art)

Through the workings of an ancient scroll, the world of ponies is transported to another universe. Will this cold, heartless, and uncaring void be the end of ponies everywhere? For to carve out a place of their own in this new galaxy, what ancient secrets, forbidden practices, and forgotten artifacts must see the light of day and night?