Luna discovers something hidden from Celestia for twenty years, now, with emotions running high, she enlists the help of the Mane 6... but what seemed to be a single mystery, soon reveals a darker and much more complicated plot that will soon decide the fate of Equestria.

Check out the Empty Room TV Tropes Page (Warning: Spoilers!)

Revised chapters edits and proofing (with many thanks) by: lammy, Trevor, Nick Nack, Fifth Alicorn

Her beauty, sullied; her wisdom, corrupt; my love for her, violated. But still I answer...

Summoned to the palace in the dead of night, Twilight takes up a burden that even her generous, loving soul may not be able to handle...

Humanized Twilight/Tyrant!Celestia.

In the magical land of Equestria, the night has lasted for a thousand years. But now, with the anniversary of Queen Luna's victory over her rebellious sister approaching, the Queen's most faithful student learns about a disturbing old prophecy. Can she, along with a hastily gathered group of allies, save the Land of Eternal Night from the dawn that Hellion Queen is trying to bring?

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This is an alternate-universe - or, to be absolutely precise, a reverse-universe fan-fic for MLP:FiM.
The cover image is a bit of fan art from DotRook over on dA: Dark Equestria: Rarity

Second (and final) chapter will be coming soon, once I polish it a bit.

Finding herself with wings and unusually powerful magic, Twilight Sparkle proceeds to have breakdown after breakdown, until with the help of her friends, she confronts Celestia and Luna about it... And learns that she's a far more important little pony than she ever imagined - for all the wrong reasons.

Awesome painting by Drezzer can be found here!

20 megapixel version is here (10MB JPEG, 210dpi strangely, 24"x20")!

Thanks, man!

Celestia wakes up in human form and at an insane asylum where similarities between the world she is in now and the world of Equestria cause her to wonder if Equestria even exists or if she simply made it up to escape her human life. Does she try to hold on to her memories of her Canterlot life or does she let them go and accept them as nothing more than stories? Who is she going to trust? Who is she anyway?

This is only the beginning...

TV Tropes Page

Cover Art by blahblahaha123 (with some altering by me.)

Reading by Phantom Brony

Editors:

Csquared08, DarkPheonix, Gweat and Powaful Twixie, HenryAnthonyCourtler, Kaidan, KartalTheWriter,ZeroOmega

Some things in this world happen by chance. Others do not. Twilight Sparkle is about to learn a disturbing truth that will turn her world upside down.

- Originally written May 2011 for Deviant Art

Reading this story first is strongly recommended:
(Blood is Thicker) http://ciroton.deviantart.com/gallery/26378692#/d3e1ndq

Credits:
~Image by JohnJoseco~ ~Edited by BrotherPrickle on Deviant Art~

Griffons have taken over Equestria, ousting both princesses by the use of power found in feasting upon Dragons.The power had turned them mad Equestria is plunged into chaos, there is no day and night. Corrupt ponies eventually join their ranks, while a small resistance tries to fight back. One pony named Starwood is plunged into the fray when he accidentally saves a pony from the grips of the griffons. One pony named Twilight Sparkle, and the baby dragon she's been trying to protect.

When Princess Celestia makes an unthinkable choice to continue on as the ruler of her people, she is forced to confront the most painful question she has ever asked herself: What will her most faithful student think of the monster she has become?

On a dark night filled with even darker magics, an insane cult attempts to give Nightmare Moon a body and life of her own, utterly separate from Princess Luna. But, when the spell is interrupted by Celestia, something unexpected is created.

Now, a little black alicorn filly named Nyx finds herself living under the care of Twilight Sparkle, only to be haunted by memories and emotions from her past. Is she Nightmare Moon reborn or is she simply a doppelganger with a soul and mind of her own? Can Twilight Sparkle protect Nyx from those who refuse to see past her dragon eyes and black coat?

Or, will Nyx be forced to inherit the sins that may not even be hers and become the greatest evil Equestria has ever known?

Nightmare Moon has won, and the world has been shrouded in eternal night. But hope still lives. The land of Equestria is currently divided between the armies of the usurper and those of the Dawn Militia. However, the greatest danger to the rebellion may not be the dreaded Mare of the Moon, but her lieutenant, Eclipse–formerly known as Twilight Sparkle.