First of the Savage Skies series.
After running afoul of timberwolves in the Everfree Forest, Fluttershy is saved by a mysterious young colt with a most unusual and disturbing feature. Realizing that he is alone, without anyone else to care for him, Fluttershy realizes that she must try to bring this lonely foal out of the forest and give him a life of love and friendship. The problem is that this colt's...unique qualities have made him more than a few enemies, including some who are closer to home than Fluttershy realizes.

Now with a sequel: The Promise of a New Day.
Now with a TV Tropes page.

When Twilight Sparkle slipped beneath the covers last night, everything had been fine. She had friends whom she loved, a teacher she adored, and a bright future ahead of her. But when she woke up, her blankets and quilts had been replaced by hospital gowns and padded restraints.

Everything is wrong and nothing makes sense; even her friends have changed. The doctors keep telling her that she is sick, that none of it was real and that it was all in her head. Yet she remembers a life far beyond the hospital walls. She couldn't have made it all up on her own. They must be lying… right?

Ask Asylum Twilight - Still updating regularly!
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Art:
Asylum Cover by conicer
Twilight and Twilight Smiles by dreamingnoctis
Mirror Twilight and Plague Doctor by Jaestring / BloodGoldWings
Twilight Smiles and Doctor AJ by conicer
Nurse Ratchet and Silas and What's in the mirror? by Archonix
Doctor AJ Sketch by Archonix | Colored and vectored version by ReFro82
Twilight's Asylum by Khan the Cake Lover
Smilight by HappySwitch
Twilight Waking Up by Dombrus
Fan Art by toxicdemon10
Asylum Twilight by Madness-With-Reason
Asylum Fluttershy and Asylum Ch 26 by Downburst-Backspace
Twilight and her Twin by v747
Birdgirl by sirValter

Readings and Videos:
Asylum Animated Trailer Video by formuladash
Reading by Gammarobot (SugarCubeRadio): All Chapters Here
Reading by Ender Brony: All Chapters Here
Reading by VisualPony: All Chapters Here
Reading by MelancholyIguana: All Chapters Here
Fan Trailer by Kaidan: Asylum FanFic Trailer Cuckoo's Nest

Sanctuary by Kaidan
Broadhoof Files: Dr. Humors by TypewriterError
Broadhoof Files: Corporal Phalanx Spear (Ret.) by Phalanx Spear
A Hearth's Warming Tragedy by Seven Fates

A special thanks to Breath of Plagues, Rex Ivan,
ChudoJogurt, Cynewulf, Death the Kid, Selbi, PrinceDolph, Blahman2816, Queue, and Gage!

Axan Zenith - Dr. Dreamer
Dratini4 - Way Finder
psychicscubadiver - Bright Mind
Velkaden - Dream Chaser
Reese - Silver Glow
Viola Heartstrings - Clover
Archonix - Spinney Whiteacre

The Ponyspawn have invaded Equestria, and it is up to the newest addition to the Grey Wardens, Twilight Sparkle, to find the means to drive them back! With her friends and allies at her side, can Twilight defeat the evil tide before all of Equestria is devoured?

The Sequel, Pony Age: Catalyst, is available.

Celestia sends Twilight a very special book that contains some of the oldest and most powerful magics known to ponykind. Included in the book is the way by which alicorns are created. Twilight visits her teacher in Canterlot to learn more, but gets much, much more than she bargained for.

I wasn't really sure what to tag this story. I chose the adventure tag because I see this story as an intellectual adventure for Twilight. Let me know if you think it should be something else and I'll change it.

Big thank you to GorisTheDeathclaw (my editor) for putting up with my typos and grammar fails, and for helping me in writing this. Also edited by my brother, but he's not worth mentioning.

Twilight's caught a special type of flu, and it's up to none other than Princess Celestia to nurse her through it. A special, tender little moment follows in this most unexpected of circumstances.

Everyone changes, sometimes for the better.

{{ An unofficial prologue to Your Antagonist's spectacular 'The Serenade of Silver Belles' }}

After a falling out with Diamond Tiara, Silver Spoon is befriended by Sweetie Belle. However as time goes by, the silver-maned filly quickly learns that she has slightly-more-than-platonic feelings for her new friend, and that some ponies aren't above petty revenge. Can Silver Spoon's new found feelings survive public humiliation, petty grudges, and potential rejection?

Cover Art and Chapter 9's art were commissions by angel-wing101, Final Chapter Art was a Commission by dragongirl983
If you use any without my or their permission, I will jump through the internet and murder you, so just ask first.

In an attempt to end the constant war between the Cutie Mark Crusaders and their biggest enemies, Diamond Tiara and Silver Spoon, or at the very least tone it down a bit, Cheerilee decides to put the five of them together in the same group for the upcoming camping trip. What's the worst that could possibly happen?

Sweetie Belle and Silver Spoon shipping inside. Thou hath been warned...eth.

This fic was originally inspired by Your Antagonist's 'The Serenade of Silver Belles', which you should all go and read.

Was originally going to be just a SilverBelle fic, but decided to expand it to also include background stories for Diamond Tiara and Silver Spoon.

Sweetie Belle and Silver Spoon spend a relaxing afternoon with one another. Also socks.

Cover art by: The-Butch-X

The Cutie Mark Crusaders are all grown up but Scootaloo still doesn't have a cutie mark and still can't fly. For the time being she is living with Sweetie Belle and bringing home the bits by competing in the Equestrian Freestyle Motocross Tour. Things get complicated when Sweetie Belle reveals her romantic interests in Scootaloo. On top of this, Scootaloo is becoming more obsessed with the sensation of falling. As the pair searches for the answers behind Scoot's borderline-suicidal tendencies, they begin to uncover secrets that threaten the well-being of all of Equestria!