First of the Savage Skies series.
After running afoul of timberwolves in the Everfree Forest, Fluttershy is saved by a mysterious young colt with a most unusual and disturbing feature. Realizing that he is alone, without anyone else to care for him, Fluttershy realizes that she must try to bring this lonely foal out of the forest and give him a life of love and friendship. The problem is that this colt's...unique qualities have made him more than a few enemies, including some who are closer to home than Fluttershy realizes.

Now with a sequel: The Promise of a New Day.
Now with a TV Tropes page.

For the longest time, Epona has served as the loyal mount of Link, hero of Hyrule. But one day, she finds out that she's actually from a world inhabited by intelligent, colorful equines. And not only that: Her daughter is one of the six main heroes from that world. But that is only the beginning.

When the worlds of Equestria and Hyrule get into contact after a millennium, lots of hidden conspiracies are revealed. Evil fiends from a time long forgotten emerge and some ponies begin to understand their powers as sages. But the one important question will be: What will Epona choose? Her friends from Hyrule? Or her family from Equestria?

In the warmth of her cloud home, Rainbow Dash is about to turn in for the night when she hears Scootaloo crying outside in the middle of a vicious blizzard. Plucking the freezing filly from the snow, Rainbow hopes to provide some much-needed comfort for the otherwise tough young pegasus, but she uncovers a disturbing reality that she knows she cannot handle alone.

Knowing only one pony that could really help her out, Rainbow enlists Twilight’s help, determined to set things straight for Scootaloo. But what Rainbow doesn’t know is that in her efforts to provide a better life for the filly, her friendship with Twilight will develop into something more.

Edited by Alcatraz, Rated Ponystar, Rocinante, Ponysopher, Marshal Twilight, Knight of Cerebus, ShimmeringStallion, and Jake The Army Guy

Proofread by Neko Majin C

Rainbow Dash isn't having a very good day. First she was in some dark place, then it turns out she's in the hospital. Oh, and she's apparently blind now.

Eventual Twidash!

SEQUAL IS HERE!!!

Inspiried by the cover art, which belongs to the awesome 8-Xenon-8 on deviantart! Also inspired by the Ask Blind Rainbow Dash tumblr blog by Jykinturah.

Youtube reading, by the awesome L0RdZovChAoS, here: http://www.youtube.com/watch?feature=player_embedded&v=6S23CkL48EM

The past always comes back to haunt the present, there is no escaping the inevitable. For decades, Celestia has kept a secret from her student. A secret she made out of pain, and through pain will be revealed for all to see; for Twilight Sparkle is the secret daughter of the Sun.

Now, there will be consequences.

Consequences, they come in all shapes and sizes for every decision. For every action there is an equal and opposite reaction. These words are lessons that Princess Celestia should know, bits of wisdom she practices in her rule of Equestria. How is it then, that when faced with a decision, she chooses the one that would inevitably bring the most pain? How is it that she couldn’t bear being recognized as the mother of her child? And why? Twilight Sparkle is about to find out.

Disclaimer: (I do not own the picture; Title Picture owned and designed by KitsuneHino; Source: http://mel-rosey.deviantart.com/art/By-my-side-364777307) (I do not own any of the characters, places, events, etc. outlined in this fanfiction, MLP FiM does under Hasbro, give them the credit.)

This story is a sequel to I Chose You

Trust is a funny thing.

Why hadn't she trusted her parents? Her brother? Her sister-in-law?

Why was she so afraid to tell them the truth?

Why couldn't she just tell them that she loved mares? Loved Rainbow Dash?

Fear is a funny thing.

Edited by the incomparable Noble Thought.

Cover art: Entwined by NyuuChanDianePie.

One hundred percent approved by Twilight's Library.

This story is a sequel to Of the Hive

Having fully embraced her new changeling heritage, Twilight Sparkle turns to the past to learn more about her people. A difficult task, given that every other queen cares next to nothing about it.

What she finds will shed unwanted light on a secret better left forgotten.

Editor in Chief: ABitterPill

Coverart: Tulip

In the wake of Chrysalis' failed invasion, a different hive breaks tradition and steps into the light to open relations with Equestria. The ever eager scholar, Twilight Sparkle, uses this truce as the perfect opportunity to learn more about this enigmatic race. Unfortunately, or maybe fortunately, she will learn all there is to know about what it means to be a changeling.

But will Twilight lose herself in the hive, or will she regain what she has lost? Only time will tell.

Featured on 9/24/13

My first featured story! You guys are awesome.

Story readings and cover art by Luminescent Skies: Click here for some audio novel treatment

My Editor in Chief: Cloud Hop

On a dark night filled with even darker magics, an insane cult attempts to give Nightmare Moon a body and life of her own, utterly separate from Princess Luna. But, when the spell is interrupted by Celestia, something unexpected is created.

Now, a little black alicorn filly named Nyx finds herself living under the care of Twilight Sparkle, only to be haunted by memories and emotions from her past. Is she Nightmare Moon reborn or is she simply a doppelganger with a soul and mind of her own? Can Twilight Sparkle protect Nyx from those who refuse to see past her dragon eyes and black coat?

Or, will Nyx be forced to inherit the sins that may not even be hers and become the greatest evil Equestria has ever known?

The storm is breaking on the Horizon.

It's been two months since the battle against Nightmare Moon. Luna is recovering, Celestia is busy turning the government back into a diarchy, and the Mane Six have returned to their lives. All seems well, but when Celestia discovers that half of the power of the Elements of Harmony have been transferred to each of the Bearers, she decides to send thirteen mysterious members of the Royal Guard to monitor them as they manifest and develop their new abilities.

The sins of a forgotten war still linger, and an ancient evil lurks in the shadows, just waiting for the right time to strike. The Mane Six suddenly find themselves once again at the heart of a conspiracy to bring about Eternal Night, and only by awakening their powers and realizing their full potential can they do anything to stop it. Friends both old and new will help them along the way, and an unseen force will guide them as it seeks to right a wrong made thousands of years ago. The Bearer's journeys will take them outside the borders of Equestria and into the world beyond, and when they return, they'll have the power and experience necessary to save the world and bring about balance in all things.

The Powers of Harmony TV Tropes Page (SPOILERS)
The Powers of Harmony Art

Thanks to Wildy71090 for the cover pic.