This story is a sequel to Too Shy for a Rainbow

If you liked this fic, check out the awesome Audio Dub version of it by The Lost Narrator!:
https://www.youtube.com/playlist?list=PLnqCBZacYIwK0xcHv85Lke-xFf5V9p7R4

It's been a month since Fluttershy and Rainbow Dash started dating. Everything was going fine until Fluttershy started experiencing horrific nightmares that started keeping her up at night. Looking for answers, Rainbow Dash, Fluttershy and Pinkie Pie seek out Twilight. But when the three mares find themselves within the world of Silent Ponyville, will things turn out for the better? Or will things end in tragedy?

Sequel: http://www.fimfiction.net/story/14866/Silent-Ponyville%3A-Reunion

The star system Omega Centauri was just another oddity on a map to scientists in the not too distant future. However when they found the star was orbiting an earth-sized, earth-like planet instead of a black hole as its motion had suggested, a mission was scrambled to investigate this most unusual of celestial behaviors.

Hamstrung by politics, and nearly crippled before it began, the 'Lone Ranger' mission was reduced to just one crew member and left to his own devices.

These are the logs of Arrow 18 and its lone commander. This information is classified TOP SECRET by the Global Space Agency.

Do NOT tell the princess.

In an alternate reality, Discord found his love of chaos came in handy for babysitting young foals. For two thousand years, since he and the princess' were kids, he's babysat nearly everyone in Equestria. Now he's babysitting the cutie mark crusaders, and while he does he recounts with them his many babysitting jobs of your favorite characters as fillies, one by one.

After a mishap with Twilight's magic, Rainbow Dash finds herself split into seven different ponies.

A very fun story

When Scootaloo moves to Ponyville, she meets a certain cyan pegasus who becomes her idol. Things go well until a pivotal event causes her hopes and dreams to come crashing down around her. Broken and betrayed, Scootaloo must learn to accept her reality and embrace her inner strength with the help of her father and two best friends.

[Now with a super awesome reading by Neighrator Pony.]
[This story's sequel can be found here.]

Twilight's cutie mark is fading, and Celestia sends her a series of lessons to rekindle her passion for magic- and for friendship. Twilight must study the magics her friends possess, as well as casting a serious eye on her own gifts.

This is technically a sequel to "Fixing Up Miss Smartypants", so I totally recommend that you read that first. It's set five years later.

In an effort to keep her mind occupied, Twilight Sparkle decides to delve once again into the grand mysteries of Pinkie Pie. This time, Twilight's focus is on her claims of growing up on a rock farm: like so many things related to Pinkie Pie, the idea that somepony could grow rocks as an agricultural product makes absolutely no sense. However, the investigation eventually leads Twilight to a rather... surprising discovery.

This is the first story in The Petriculture Cycle.

Artwork by Page Turner. Now with a TV Tropes page.