Applejacks parents never had time to play with her as a filly so she ended up spending a lot of time by herself. As a result she starts playing games with her imaginary friend "Mr. Tall."

(Side story from Slendershy I realized that this could stand as its own story and be fine, if people like it i'll expand on it)

During Discords reign of chaos over Equestria, he managed to corrupt everypony in Ponyville. Even Twilight Sparkle. But how will he deal with a mysterious stranger that refuses to be corrupted?

(Takes place during the Return of Harmony)
(Based off of the story of the Buddha vs Mara)
(Discord and Buddha are like foils for each other)
Edited by syvvak

Some experts think that Slender Mane is a type of sentient tree.
Some of Fluttershy's friends thought Fluttershy was a tree.
They are both half right.

Fluttershy's nineteenth birthday sets into motion a chain of events that makes her question who she really is. Meanwhile Slender Mane slowly closes in on her.

(based off of Tribe Twelve)

The Daleks have their sights set of taking over Equestria. The only thing that stands in their way? The Elements of Harmony. A Dalek genius named Zek has crash landed in ponyville. His goal? Destroy the elements of Harmony.
However not all goes as plan as Fluttershy falls in love with the Dalek. Can Fluttershy make the killing machine love her back?
Or will her delicate heart be EXTERMINATED? (An alternate universe of the Dalek Invasion, from Fluttershy's perspective with Dalek shipping for fun)

(Dragon Bal Z Narrator voice) A long time ago there was a great battle fought on the Planet of the Kai. The battle was between Goku and the monster Kid Buu. Buu was thought to have been destroyed by the Spirit Bomb, but unknown to Goku he escaped to Equestria before he was completely destroyed. Arriving in a weakened state, he absorbed the first pony he came across, which happened to be the filly known as Pinkamena Diane Pie.
This is the story of adventure, friendship, violence and lazer beams. But more importantly this is the story of how Pinkie Pie got her Cutie Mark. (Abridged series are semi-cannon especially Friendship is witchcraft)

It was a a beautiful night in Ponyville. Twilight and her best friends are out sky gazing when suddenly a mysterious craft crash-lands in the Everfree Forest. The six ponies rush in and discover a crippled Dalek. Unknowing of the Daleks's evil nature they take the Dalek under their wings. With more Daleks on the way, a mysterious evil fobs watch, and no Doctor in sight, can Equestria survive the invasion?