Editors: Fire Starter, Alcatraz, and Neko Majin C (Recently: Seven Fates)
Additional Story tags: Clarke's 3 Laws (More specifically 1 & 3)
Cover Artist: PosionSt

In the year 2036 an asteroid dubbed "Apophis" struck the Earth and contaminated fifty percent of its water and atmosphere with an extraterrestrial pathogen dubbed "The SOL Strain." After two years, sixty percent of all human life was gone! With the world's governments struggling to keep their countries together; all seemed lost.

That is where my story begins.

My name is Chloe Cooper and I'm the only known human to be genetically immune to the SOL Virus. During the pandemic, I volunteered myself for experimentation. In order to keep me safe, I and three other humans were locked away in a vault deep within the Appalachian mountains. There these people, who I soon considered my friends, ran many tests on me and the virus, however after months without contact from above it was time to put the project to rest.

Cryostasis pods dubbed: "Cocoons" had been built in case we failed. 16,000 years later I awoke to sirens, signaling a whole host of problems.

And now? I'm the last of my kind.

Character tags will be updated depending on where the story goes

This story is a sequel to Stardust

Times are changing for Equestria as Twilight’s return brings with it news of people and cultures from beyond the peaceful world everypony knows. Aid and volunteers are freely offered to help the besieged humans of Earth because every Equestrian knows that’s what good friends do. Unfortunately, making friends can also have the unintended consequence of making enemies.

When the monsters besieging the humans strike at Equestria with a level of brutality not seen in over a thousand years, the cry for help is sent to all the kingdoms of the world. Honored allies step forth to fulfill ancient treaties and oaths. Enemies, old and new, bury their grievances. An alliance never before seen in Equestria will be created to combat the monsters from the void.

And because of these events, a grim but welcome sibling to the XCOM project is born.

(XCOM/FiM Crossover)
(Sequel to Stardust, which I recommend reading before starting this. Fortitude Amicitia and Broken aren't required reading but are supplemental to the storyline)
(Gore tag for blood and violence)
(Alternate Universe tag because of the divergence from canon that Stardust has caused)
(Uses elements of Season 4)
(Coverart produced by the amazing Carnelian!)
(Many thanks to Arzoo, BradTheBrony, Vandenbz and Setokaiva for prereading!)
(As of 03/07/2016, the prereading team consists of Arzoo, BradTheBrony, Noble Cause and Metallusionsismagic!)
(Complete with it's own TVTropes page as part of the Stardust continuity. Could use some updating!)
(Character tags will be added as chapters are added!)
(Featured 5/12/2014! Thanks folks!)
(Possible spoilers in the comments! BEWARE!)

It has been one of the closest guarded secrets of Canterlot's royalty. Deep in a specially constructed dungeon, surrounded by warding spells and powerful magic barriers, exists an enigma. Within a cage that could only be described as something out of a nightmare, it waits and watches all of Equestria. A creature that cannot age, is immune to disease, does not thirst nor hunger, and resists all injury. But, it also holds secrets and knowledge that could safeguard the kingdom. Its powers are frightening, but it is civil enough for debate when patience permits.

Princess Celestia has sought counsel with the creature before, enduring it making deal after deal for its services. The Princess walks a fine line when dealing with it, knowing full well anything could give it an advantage despite its imprisonment. She has had to go back on her word in these dealings, and from this a deep animosity between them has been born. It is a necessary evil as she is convinced this is a being capable of untold evil far and above anything Equestria has ever dreamed of. So long as it remains within the confines of its cell, her kingdom is made safe. So much magic has been woven to ensure that, there is little chance of escape.

So long as the magic holds, there is no danger. So long as the cage remains strong, the nameless creature stays enthralled in his cavernous dwelling. If that were to change--if the magic failed--not even the wisest could say. But one thing is assured, it does not bode well for Equestria.

After the changelings' failed invasion of Canterlot, Twilight tries to soothe some of Ponyville's rampant paranoia by casting a spell to prove there are no imposters hiding in the town. But her spell leaves her in an alien body, facing a mob of angry ponies who just don't believe her when she says she is Twilight Sparkle.

Or, at least, she was Twilight Sparkle, anyway...

Featured on Equestria Daily, 2/17/13
Cover art is by the awesome and amazing Conicer

This story is a sequel to Project: Sunflower

After the events of Project: Sunflower, Erin Olsen has returned to Ponyville, happy to pursue her studies in magic. After everything that happened the year before, she's looking forward to spending her days studying and having fun with her friends.

Meanwhile, on the newly discovered world of Harmony, humans and ponies work together to study this strange new world. However, their arrival causes something ancient to begin stirring. Something that may end up changing everything.

Erin will need all of her courage, all of her cleverness and, of course, all of her friends to see herself through what happens next.

Cover art by Valkyrie-Girl
Editing provided by:
Brilliant Point, Coandco, Ekevoo, Ludicrous Lycan, Merlos the Mad and Razalon the Lizardman.

King Sombra’s dark influence was obliterated by the Crystal Heart, and the villain is well and truly dead. But when he attempts to steal the afterlife of an innocent victim, a human spirit is left hurtling towards Equestria, where this unfortunate soul is revived into the only vessel available: the reconstituted body of King Sombra himself.

Thus, a cheerfully oblivious alien is crammed into the form of the most evil and malicious being Equestria has ever known. Not that Shining Armor and Cadence know this, of course. As far as they are concerned, the King is back and he’s lost his fricking mind.

Click here for the TV Tropes page!