This story is a sequel to Dinky Who

Pinkie Pie meets Doctor Whooves for the first time. He cleverly lies and says his name is Time Turner and he fixes clocks. He's surprised when she approaches him with a pocket watch...wait...those marks...is that Gallifreyan?
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Author's note: It's best to be a Whovian if you are to read this. While I try to write this as simple to understand as possible, it just makes the story a better read.

Also, this Doctor Whooves is based on The Doctor from the Doctor Whooves and Assistant series. This point is after Appleoosa and prior to the events of Wrong Way Backwards. Familiarity with source material will make the story better.
Thank you.

Join Celestia from days of a filly to when she rules equestria and beyond. As she lives her days and adventures with mysterious stallion known only as the Doctor. Struggling to understand him and his ways falling for him later on in life.

Long ago, when Princesses Celestia and Luna both ruled together, a war was fought in the shadows between Luna's Brotherhood of Assassins and Celestia's Order of the Knights Templar. Blood was spilled across Equestria until the banishment of Princess Luna, and the Brotherhood went into hiding, while Celestia and her Templars gained complete control of Equestria. The return of NightMare Moon and rebirth of Luna brought the Brotherhood out of hiding and the war between the Brotherhood and the Templars began once again. The Brotherhood's targets are all known as the "saviors" of Equestria, the bearers of the Elements of Harmony.

Daring Do finds herself over her head during a treasure hunt gone wrong, and seeks help from her sister Ditzy Doo and her strange companion who simply calls himself The Doctor. Together they begin to piece together a conspiracy that has remained hidden in the shadows of Equestria for centuries and extends to nearly all echelons of society. Can the trio discover what their goal is in time to stop it? Find out in DARING DO AND THE KNIGHTS OF TIME AND SPACE!

This story is a sequel to A Storm of Chaos: A Doctor Whooves Adventure

Isn't that always the way? The Doctor has finally gotten used to the idea of taking a little break from Cyberponies, genocidal madponies, gods of chaos, and the other assorted craziness that is his life, and his future self and companions just crash his place.

Literally.

Well, that can only mean one thing, can't it? Time to dive right back into that wibbly wobbly ball of timey wimey stuff. But can the Doctor deal with another one of himself for any length of time?

No. Probably not.

Thanks to sgamer82 for the creative input.
Going with an old favorite placeholder image for my cover.

A strange sickness has infected nearly everyone in Ponyville. It seems there is no hope for a cure - until Twilight stumbles across a strange blue box...

Dinky has always known her mother was a little different from a lot of ponies she met. Her eyes went in different directions, but this never bothered the filly until class bully Diamond Tiara began to mock her mother, setting Dinky into a rage. Because of a misunderstanding both mother and daughter believe the other doesn't like them anymore, and they try to make amends towards each other. In doing so Derpy reveals her regrets from the past where a cruel stallion broke her heart and left her alone and pregnant.

Will Derpy be able to overcome the past to find happiness in the present?

Coverart taken from a comic by doubleWbrothers. http://doublewbrothers.deviantart.com/art/Normal-371395121

Twilight's Cuckoo Clock stopped working, so she took it to Time Turner to have it fixed. It turns out to be an ancient artifact covered with seals and filled with mechanical impossibilities. What secrets is the library's Cuckoo Clock holding? ((NOT a Dr. Whooves Story))

After a little crazy adventure in the T.A.R.D.I.S of Dr. Whooves, he and Twilight hear a strange sound, right after, Twilight started to act a LOT strange, flirting with the doctor, there are various questions that Star Racer, the mane 5 and Dr. Whooves are desperately trying to find an answer:

What is going on with Twilight? Is that going to end? Why does Star Racer is helping her? And why does Doctor Whooves is feeling at the same time a little embarrassed and happy? The own Dr. will have to find the answers...

But the more he tries to do that... The more he grows in love with her...

Twilight Sparkle X Doctor Whooves sorry for the Derpy fans...

I never thought I was special in any way. Not until my whole life had been turned upside-down. Being the daughter of two of the most powerful beings pony kind has ever known was one thing, but the list of problems will only continue to grow with my family. And on top of that, after twelve years I still haven't discovered my cutie mark. Hopefully this family trip to Saddle Arabia will be enough to set this family straight. But, for both time lords and alicorns, where they go, trouble will always follow. My parent’s stories should have been the herald for my future. My name is Silver Star, and this is only the beginning of my story. The story of the one family that tore Equestria apart.

Co-writers—Arched Lightning and Funnybunny514
OC’s—Silver Star, Clockwork, Rosaline, and Buttercream Sundae by: Funnybunny514
Edited by—Arched Lightning and Funnybunny514
Cover Photo- Arched lightning.