(Crackdown 2 crossover. Playing both Crackdown games will probably make it easier to understand some subtle references.)
(Edited a bit of the 2nd and 3rd chapters, mostly fusing sentances and making it slightly easier to read.)
Canterlot is slowly facing its destruction.
On one end, severely mutated ponies labeled "Freaks" are tearing into the population.
On the other, a group known as the Lunar Republic aims to overthrow the Solar Empire.
The Empire won't go down easily, though. They run organised law enforcement, commanding squads of Royal Guards and the efficient and deadly Agents.
A plan has been put into place to cleanse the city of all threats to the citizens and Empire. Will the Empire stop the anarchy, or will the chaos of ponies without rule eventually bring the city to its knees?