When Rainbow Dash accidentally knocked Fluttershy off to defend Fluttershy's honour, Fluttershy fell for hours metaphorically, but instead of butterflies catching her she fall into a tree were vampire fruit bats were sleeping. She was also unfortunate enough to have her neck land on the two fangs of said type of bat.

Two applefarming parents saw this happening in front of their eyes and took her home, the filly transformed into a Pegasus/Fruit Bat hybrid in front of their eyes. It also made the Filly more animalistic with barely anything pony remaining in her. So they decide adopting her in hope they can bring the filly back to her senses (her pony senses that is), and possibly find a cure for her.

But an apple sucking demon for a sister is not really something Applejack would like if she came back from Manehatten.

Also if hadn't caught on that Applejack and McIntosh's parents are around. They are.

Aiming for 0% Twilight (Stephenie Meyer) jokes.

Requested by J-Rook in these two forum posts.

Edit: 03-07-2014 (dd-mm-yyyy)
This story somehow managed to weasel its way onto the popular list. A Firebird first I think... Strange.
Edit: 03-07-2014 And it was at the top for a little while. What the...

Everyone keeps secrets. Even Fluttershy, she has a daughter she left at an orphanage.

Based on the pictured comic, but expended slightly. Click on source for the original comic.

Takes place before The Club's Connected to the Boutique. But it ties in very, very, very, very loosely.

Rated T for mild, mild, mild, mild, mild, mild sexual themes. It's for safety measures. I'll turn it into an E if people think it should be an E.

Read in either of these orders you like. But as of now they barely connect.
Chronological order:
Fluttershy's Second Greatest Secret
The Club's Connected to the Boutique
Well, That's Just Silly

Chronologically made:
The Club's Connected to the Boutique
Fluttershy's Second Greatest Secret
Well, That's Just Silly

This story is a sequel to Applejack and Moneybags

One day, Lightning Dust was moping on a could until a kart suddenly came out of nowhere from above. It bearly missed her.

One day, Polar was kart racing and in first place. But suddenly a time warp came out of nowhere, and it malfunctions too. Now he's in a strange Pony obsessed dimension on top of a cloud having bearly missed landing on a Pegasus.

Fourth in a pseudo one-shot series I like to call: Slightly Random Pony and Even More Random Game Character. Or SRPEMRGC or Pony and VGC for short. Where every character will be treated with respect, unless that goes against the characters existence/purpose. They won't have an overarching plot, each story can be enjoyed on its own. They take place in the same universe though.
1: Rainbow, Big and Froggy
2: Princess Twilight and Dr. Nefarious
3: Applejack and Moneybags
4: Lightning Dust and Polar

This story is a sequel to Princess Twilight and Dr. Nefarious

Moneybags annoys Applejack thanks for his need of money.

Moneybags is based on his depiction in the PS1 era.
Requested by -TGM-
P.S. I won't be taking requests unless it's an idea I really like.

Third in a pseudo one-shot series I like to call: Slightly Random Pony and Even More Random Game Character. Or SRPEMRGC or Pony and VGC for short. Where every character will be treated with respect, unless that goes against the characters existence/purpose. Moneybags isn't getting much of the former treatment.
They won't have an overarching plot, each story can be enjoyed on its own. They take place in the same universe though.
1: Rainbow, Big and Froggy
2: Princess Twilight and Dr. Nefarious
3: Applejack and Moneybags
4: Lightning Dust and Polar

This story is a sequel to Rainbow, Big and Froggy

After personally inspecting Ratchet, Clank and Qwark proof traps in an unknown galaxy on his ship, Lawrence 'accidentally' opened up a trap door into the nearest planet. This wouldn't be a problem if Dr. Nefarious wasn't standing on it. Unfortunately he landed near Princess Twilight.

Crossover with the Ratchet and Clank games. Takes place after All 4 One.
Rated T for two mild swear words, one of which is cut off.
Suitable for everyone else if the first few games' ratings are to be believed.

Second in a pseudo one-shot series I like to call: Slightly Random Pony and Even More Random Game Character. Or SRPEMRGC or Pony and VGC for short. Where every character will be treated with respect, unless that goes against the characters existence/purpose.
They won't have an overarching plot, each story can be enjoyed on its own. They take place in the same universe though.
1: Rainbow, Big and Froggy
2: Princess Twilight and Dr. Nefarious
3: Applejack and Moneybags
4: Lightning Dust and Polar

After Rainbow Dash stumbled over rock near a river because she tried to land as close to said river without falling in, she going down the stream that takes on the other side of Canterlot mountain. The river takes her to a Big purple fisherman and his frog best friend, who save her. If Rainbow bothered to take her swimming lessons this never would've happened.

The (self-proclaimed) most subdued MLP crossover with the Sonic The Hedgehog games.

The first in a pseudo one-shot series I like to call: Slightly Random Pony and Even More Random Game Character. Or SRPEMRGC or Pony and VGC for short. Where every character will be treated with respect, unless that goes against the characters existence/purpose.
They won't have an overarching plot, each story can be enjoyed on its own. They take place in the same universe though.
1: Rainbow, Big and Froggy
2: Princess Twilight and Dr. Nefarious
3: Applejack and Moneybags
4: Lightning Dust and Polar

It's time for Discord's weekly visit to Fluttershy's a day after the events of the episode "Bats!". So unknown to everypony, Fluttershy still will forcibly transform into FlutterBat every night. Discord takes it well, he can even tame the beast, much to Fluttershy's and everypony else's relief.

In no relation with the EQD's Writers Training Grounds #1 thingy that has been going on.

Pinkie Pie has always been the most social pony, but a it's a little known fact that she has issues. Never mind, everyone knows that. But it's more severe than everyone thinks.

In fact, there's other side to her.

This is not original description, which is lost. So it might be not as fitting. This is also not the same artwork.
I got promoted from editor to writer.
Original story (and the first four chapters) by ponyofawesome92 (Now Midnight Rose)
(saved from deletion limbo)

This story is a sequel to Fluttershy's Second Greatest Secret

Scootaloo somehow managed to get an interview with the Ponyville most well known musicians for the Cutie Mark Crusaders. The musicians were Octavia and Vinyl Scratch, during the interview Octavia was skeptical about of her best friend, she didn't have much to say and she was acting odd around them, and then she realized that she doesn't know much about her herself. So after a while Octavia's curiosity gets the best of her and is determent to find out why that is. Finding out Vinyl's Jarring, embarrassing and interesting secret in the process, along with a filly named Sweetie Belle.

Comedy is debatable.
And so is Slice of Life.

Read in either of these orders you like. But as of now they barely connect.
Chronological order:
Fluttershy's Second Greatest Secret
The Club's Connected to the Boutique
Well, That's Just Silly

Chronologically made:
The Club's Connected to the Boutique
Fluttershy's Second Greatest Secret
Well, That's Just Silly

Fluttershy gets hypnotized by Rarity before she goes of to Canterlot for a week,
because of reasons you will read in the second chapter, But Rarity accidentally leaves a hypnotic suggestion in her subconsious.
Poor Fluttershy...
First story I am critic proof but will listen to any critisism (also english isn't my strongest point)

I added it to the Fan/fic/ Theater 3000 group, because why not? Riff it if you like. Get creative. And let me know if you riff it, no hard feelings will be involved.