Strife runs rampant throughout the Galaxy! Powerful weapons of war roam the cosmos and beings with power of a tremendous scale move about the galactic stage. Even now a once ally of Twilight searches for the key to finally end this conflict.
A new adventure awaits Twilight Sparkle, years into the future, as she is crowned co-ruler of a planet several solar systems away from home... But she wakes up early and is alone on the ship. How will she cope with a over a century alone?
Twilight and her friends are no longer part of the elements of harmony, and have separated paths with each other. They are now part of the C.M.E (Celestial Marines of Equestria) and have intercepted a signal from the planet LV426.
Unicron awakens, threatening Cybertron's existence. Galvatron refuses to see the truth, however, and Starscream sacrifices himself to unite the warring factions. But instead of death, Starscream is gifted with continued life in a new land.
The Republic discovers that the CIS is involving itself with a planet outside of their galaxy, and as a response, they send Victor Squad to investigate. Little do they realize that their actions could determine the outcome of the Clone Wars.