After much cleaning up, the warehouse was in perfect condition again for the performance the ninjas were meant to put on. Everyone was back in their seats, with Cinch out of her ninja armor sitting next to the Mutanimals, while trying not to feel awkward. Fugitoid took the mic again and spoke into it, "Welcome back,my friends. Forgive us for that interruption a moment ago. But when you're with this group it's never simple. Now then let's have another round of applause for our heroes the Rainbooms, Shadowbolts, and Ninja Turtles!" The students cheered once again, as the curtain went up and the heroes began performing.
Sunset Shimmer: I feel it stirrin' deep down inside my soul
Karai: The rhythm's taking hold, and it's about to roll
Twilight Sparkle: A million sparkles falling across the floor
Leo: So, DJ, give it more, it's what we're looking for
Everyone: Dance the night away
All our friends right by our side
It doesn't matter what style you bring
We're about to go on that ride (Hey!)
It's dance magic, once you have it
Let your body move, step into the music
It's dance magic, and it's electric
Let your body move to the music
Mikey: (rapping) Doesn't matter what style you got
Just keep dancin' on that spot
Your friends like you for who you are
Dance queen, on the scene, superstar!
Pinkie Pie: (rapping) Crystal Prep and Ninja Turtles, you got the moves
Rainboom bringin' all the grooves
Put it together and make it fit
Ninja Crystal Rainbooms, dance magic
Everyone: Dance the night away
All our friends right by our side
It doesn't matter what style you bring
We're about to go on that ride (Hey!)
It's dance magic, once you have it
Let your body move, step into the music
It's dance magic, and it's electric
Let your body move to the music
Ninja Crystal Rainbooms got a style that's all our own
Dancin' nonstop, body movin' in the zone
Bring whatever style you got
'Cause the party is goin' on
It's dance magic, and it's electric
Let your body move to the music
The audience consisting of the students and the mutants had gotten out of their seats and began rocking to the rhythm with the performers. Even Principal Celestia, Principal Cadence, V.P Luna, and Cinch got up to dance along. Sunset Shimmer reached down to Fugitoid who took her hand and was brought up to the stage to dance along with her and the others. The Shadowbolts pulled Indigo and Keno up to the stage, Twilight pulled Starlight up, and Shini pulled Juniper up on stage. And so the whole ninja crew danced away and partied.
Afterward, all of the students were catching up with their mutant allies along with the Crystal Prep students getting to know their new mutant friends better. By the snack and refreshment table were the ninjas relaxing from their performance, "We nailed it, dudes!" Mikey cheered.
"I gotta say we did very well." Donnie admitted.
"We were super!" Pinkiie cheered.
"Indeed," Principal Celestia answered, as she approached with Luna, Cadence, and Cinch, "Once again you all worked together and saved not only the students of CHS, but Crystal Prep as well."
"You all have my gratitude," Cadence commended them, "And you, Leonardo. Thank you so much for being there for Twilight."
"No problem, ma'am." Leo answered, as he smiled at Twilight who returned the gesture.
"This is definitely going to be an experience Princess Twilight will wanna hear." Sunset told the group who agreed.
"I'm sure she'll get a kick out of it." Fugitoid laughed.
"Professor," Celestia began, "I was wondering if you would be interested in a proposition of mine."
"A proposition?" Fugitoid asked.
"Yes. Since you don't have too much to do aside from assisting the girls in whatever matters, I was wondering if you would be interested in being our new Science teacher since our last one decided to retire?"
The group of ninjas were surprised at the offer, as Fugitoid was flabbergasted, "You want me to teach at CHS?"
Celestia nodded, "Someone with your brain would be perfect to teach the students about science. So do we have a deal?" she offered Fugitoid her hand.
Fugitoid looked to all his friends who was beckoning him to take the job. Fugitoid looked back at Celestia and shook her hand, "I accept the job, Principal Celestia."
"Good. You start when we get home."
"Congratulations, Fugitoid." Fluttershy smiled at him.
"Learning under you should be fun." Pinkie added.
"Hopefully not too boring." Rainbow replied.
"Thank you all. This could be the next chapter of my new life." Fugitoid said happily.
Meanwhile at Steranko's warehouse, Rocksteady and Bebop were lounging around and dealing with their failure. Bebop spoke to his partner, "If we ever see Stockman or any of those ninjas again, it'll be too soon," he noticed Rocksteady wasn't even paying attention, "Yo, Ivan. What up?"
"Huh? Oh, comrade. Is nothing." he answered.
"You sure? You look out of it. Probably because you had to dump your ex again. Can't blame ya though. I mean you heard what she did. And people say we're bad guys. But trust me, ya did the right thing."
"Da. The right thing." Rocksteady replied, but felt unsure. He looked at an old picture of himself and Cinch when they were teenagers looking happy together. Even with all that went down, he wouldn't say it out loud, but he still cared about her.
The next morning, the ninjas of New York and the girls stood on opposite sides once again bidding farewell. Leo spoke to Twilight as they embrace, "Take care, Twilight."
"You too, Leo."
"Oh, Mikey! Leatherhead!" Pinkie bawled as she hugged the two.
"It's ok, Pinkie Pie." Leatherhead consoled her.
"Yeah, girl. We'll see each other again soon enough. Mikey added.
Rarity embraced April and Donnie, "It was so much fun working together like before." Rarity told them.
"Yeah. We really have to get together more often." April agreed.
"Hopefully when there's nothing after our heads." Donnie humored them, and they laughed.
Rockwell and Casey were saying their farewells to Rainbow and Applejack, "You girls take care now." Rockwell began.
"Count on it, Doc." Rainbow replied.
"And come back any time." Casey added.
"You betcha, Case." A.J answered.
Fluttershy hugged Slash, "No matter how many times we'll meet again, I'll always miss you when it's time to go." she told him.
"I know, Fluttershy. I know."
Sunset and Fugitoid spoke to Raph and Mona, "You two love birds take care now." Fugitoid warned them.
Mona blushed, as Raph replied, "Funny I was gonna tell the same to you guys." Fugitoid and Sunset got flustered like Raph and Mona.
Starlight was saying her farewells to Karai and Shini, "I'll be sure to let Princess Twilight how things are going here."
"Thank you so much, Starlight." Shini said.
"And if there's any problem on your end. Let her know she can count on us to help." Karai added.
"You know it." Starlight smiled.
Keno was embracing Indigo and saying a farewell to the Shadowbolts, "It was great fighting along side you girls."
"Same to you, Keno." Sour agreed.
"You take care, Keno. And don't get yourself into too much trouble." Indigo told him.
"Might be hard if the trouble comes looking for me." Keno replied. Indigo chuckled and the two shared one last kiss.
Juniper was hugging Bandit, "I'll miss you, Bandit."
"Same here, Juniper. But hey, now that I'm kicking it with the Mutanimals I won't be so lonely anymore."
"Just like me now that I've made friends as well." Juniper agreed, as they cuddled.
"Come on team, let me hear it all around!" Mikey called, and everyone shouted.
"BOOYAKASHA!"
The heroes of New York watched as their friends headed down from the roof and got on their respective buses that headed back home.
"There they go." Mikey watched them leave.
"Yep." April agreed.
"Now it's back to us doing what we do best." Leo told them.
"Stopping evil." Raph said.
"Fighting crime." Casey added.
"And looking out for each other." Slash finished.
Some time later back at CHS, Starlight had returned home to Equestria, and the Shadowbolts returned to Crystal Prep. One morning the Rainbooms had entered the science lab and awaited for their instructor. Soon, the door to the lab opened, and walking inside was Fugitoid wearing a lab coat. He went to his desk and spoke to the students.
"Good morning, everyone. My name is Professor Zayton Honeycutt, and I am your new Science teacher. I hope we get along well." he said, as the Rainbooms smiled knowing this was going to be some school year.